Hemicordylus capensis (graceful crag lizard): 128348841
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Entry
128348841 CDS
T08891
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128348841 (SCAF4)
03041 Spliceosome [BR:
hcg03041
]
128348841 (SCAF4)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128348841 (SCAF4)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
128348841 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
XMAP215_CLASP_TOG
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128348841
NCBI-ProteinID:
XP_053160493
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All DBs
Position
3:complement(87144884..87220704)
Genome browser
AA seq
1073 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGASSTTSMTEDATNNEGSPPPATMIPSEPPQVASNSVPTVPTVP
QLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPVIDNNVMAQVQAITAQLQTTT
TQPSEQKHDFSAPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSVPSPSVSQPTFGFPGE
GIQQPVYPQLPNIDQFQQRMLGMPQDPMLHQVPLPPNGQMPSYGLLPAPQFPPMAQPVIQ
PSPQVQQSFQPSFSAQNEPHTQKTHQQEMEVDQPAAQEVKRHESRKSRSRSASRSPKRRR
SRSGSRTRRSRHRRSRSRSRDRRRHSPRSRSQERREREKEKARRTKGLPPIKAETVSVCS
TTLWVGQLDKRTTQADVGGLLEEFGPIESINMIPPRGCAYIVMMQRQDAYLALQKLSRGN
FKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWGKIKPEDLESFCEGGMLDNETLR
PEWKGIPKKSENQVAHNGGARGGEATHNEQTPVTKTLSVQMPVPMPAPITVPPPQVPPHQ
PGPPMVGTLQPPTFTPPLGIPPPGFGPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI
NPPVSVPPVSVPPSPGVNIPNSTVASINEDTTKDSSVGNPIPTVVSGARANAENADGSKG
YPNAPPPATSSSIPAPVTQPVPLLGTQGVTPSPVIGLQAPSTGLLGARPGLIPLQRPPGM
PPPHLQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPPGHFVRPGGMPGGG
PDDNRDGRQFRNDRQPFTPNRDQERFGRRSFGNRIENERYGNRNDDREHERLGNRERREW
GRRSPERDRHRDLEERNRRFSGHRERDSRDRESRREKDENRGKEKPELTDRVDGVKNHES
QSGKVENTDTVSELNKGESEPTDVKPAEELTSETTSSLEQPEKSAGSVAEAPR
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaacgccttcaaccaggagctcttctcactgatggaaatgaaaccacct
atttctcgtgcaaagatgattctcattactaaagctgccattaaagctattaagctttac
aagcatgtagtccagattgtagagaagtttataaaaaagtgtaagccggaatataaagtt
cctggattgtatgttattgactctattgttcgtcagtctcgtcatcaatttggaacagac
aaggatgtttttgggccaagattctgtaaaaatataactgccacattccagtatttatat
ctgtgtccatcagaagacaagagtaagatagttcgtgtgctcaacctatggcagaaaaat
ggagtgtttaaaatagaaataattcagcctctcctggacatggcggcgggagctagcagt
acaacttcaatgacagaagatgccactaataatgaaggttcaccacctcctgccacaatg
attccatctgagcctccccaagttgcttctaattcagtacctactgtacctactgtgcca
caactgcccagttctgatgcctttgcagctgtagctcaattatttcagacaacacaagga
cagcagctccaacagattcttcagacctttcaacagcctccaaaaccccagtccccggtg
atagataataacgtgatggctcaggttcaagctattactgctcagctacaaacaacgaca
acacagccatcagaacaaaagcatgatttctcagcaccagagcaaaagacatcttttgat
aagaagctgctggatcgatttgactatgatgatgagccagaagcagtggaagactcaaag
aaagaggattcagtgccttctccttcagtctctcaaccaacatttggatttccaggtgaa
ggcatacagcagccagtttacccacagctcccaaatatagatcaatttcagcagcgaatg
ctggggatgccgcaggaccctatgcttcaccaggtcccacttcctcccaatggacaaatg
ccaagctatggacttttacctgctccacaattccctccaatggctcagcctgtgatacag
ccttcacctcaagtgcagcagtctttccagccatccttttctgcacaaaatgaacctcat
acacagaaaacacaccagcaggaaatggaagtggatcagcctgctgctcaggaagtaaag
agacatgaaagcagaaagtcacgatctagatctgcatcaagatcacctaagaggagacga
tcacggtctggttctcggacacgaagatcacgtcatcggcgttctcgttcccgatctcgg
gacaggcgccgccattctcctaggtcacgatcccaggaaaggcgtgagagagagaaagag
aaagcgcgcagaacaaaaggccttccgccaatcaaagcagaaactgttagtgtttgcagt
actacactctgggtgggacagctggacaaaagaacaacacaggcggatgttggaggtctt
ttggaagagtttggcccaattgaatctataaatatgattccaccaagaggatgtgcctat
attgtaatgatgcagagacaagatgcataccttgccctgcaaaaactcagtcgaggcaac
tttaaagtgaatcaaaaatctataaagattgcatgggctttaaataaaggaattaaacca
gactataagcagtattgggatgtggaattaggtgttacctacataccctggggaaaaata
aagcctgaagatctggaaagtttctgtgagggaggaatgctggacaatgaaacacttcgt
ccagaatggaaaggaattcctaaaaaatcagaaaaccaagttgcccataatggaggtgca
agaggtggagaagctacacacaatgaacaaacacctgtaactaaaactttgtcagttcaa
atgcctgttcccatgcctgcaccaataacagtgcctccaccacaggttccaccacatcaa
ccaggccctccaatggttggtacactacagccacctacatttacccctcccttaggaatt
ccacctcctgggtttggtcctggagttcctccaccaccacctcccccttttttgcgacct
ggcttcaatccaatgcatttaccaccaggttttcttcctcctggaccaccaccacctatt
aatcctccagtttcagttcctccagtatctgtccctccttctccaggagtaaatattcca
aactctactgtggccagtataaatgaagatactacaaaagactcttctgtgggaaaccct
attccaaccgtagtttctggagctagagcaaatgctgaaaatgcagatggttccaaagga
tatccaaatgctccaccacctgcaacttcttctagcataccagctcctgtcactcaacct
gtcccactccttggtactcaaggagttacacctagtcctgtgattggcttacaggcacct
tctacaggccttctgggtgcacgacctggtttgataccactccagcgacccccaggaatg
ccaccacctcatctgcagcggtttccaatgatgccacctcgtcatatgcctcctcatatg
atgcacagaggtccacctccaggcccaggaggctttgggatgcctccacctcatgggatg
aagggtccttttccaccaccgggccactttgtgagacctggtggaatgcctggaggggga
cctgatgataacagagatgggaggcagttcaggaatgataggcagccatttactccaaac
agagaccaggaaaggtttggaaggaggtcttttggaaatcggatagaaaatgagcgctat
ggtaaccgcaatgatgacagagagcatgaacgtcttggtaatcgtgaaaggagagaatgg
ggaagaagaagccctgaacgtgatagacacagagacttggaggaaagaaataggcgtttc
agcggacatagagagagagattctagagatagggagtctcgcagagaaaaggacgaaaat
cgagggaaggagaaacctgagttgacagacagggtagatggtgtcaaaaaccatgaatcc
caaagtggcaaagtggaaaacacagacactgtttcagaactgaataaaggggagtctgaa
cccacagatgtaaaacctgctgaagagttaacatctgagactacctcatctcttgaacaa
cctgaaaagtctgctggctcagttgcagaggctccacgctag
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integrated database retrieval system
