Hemicordylus capensis (graceful crag lizard): 128348908
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Entry
128348908 CDS
T08891
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128348908 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128348908 (TRIP12)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128348908 (TRIP12)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
HECT type E3
128348908 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
128348908
NCBI-ProteinID:
XP_053160611
LinkDB
All DBs
Position
3:complement(312956927..313124701)
Genome browser
AA seq
2069 aa
AA seq
DB search
MSNRPNNSPGGSLRRSQRNTVGAQPQDDAVGGRSHLGQAKHKAHSPSESRKSISKAPKVQ
SNTTSEQSKGHFSKRGCSSSAIIIPQQEALDTDNTLERQKLGQVPKKDSSRGVKRSASPD
YNRTNSPSPAKKTKALQHADSSSDLETSKPQAKSKKRHLHQEQESKSSQLPSTSKAHTRK
GGATSSSRSQKRKRTETSPIVKSRPAAESTGTEERPAKPTKLASKSASSAKAGCSTITDS
SSSASTSSSSSVVASASSAVPQGARVKQGKDQSKARRSRSTSSPSPRRSSRDKEQNKIGG
SSKFDWAARFSPKVSLPKTKLSLPGSSKPEASKPGPSGLQAKLASLRKSTKKRSESPPAE
LPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDDNQDGVNSSAARADET
PQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRT
IGSGASSKAQQLLQGLQATDESQQLQSVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQ
MEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSL
ICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHPELKKDDARAQL
MKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSP
PKACTNGSGTLGATTAISPGTATAASNPASDLGSPSLQHSREDSLDLSPQGRLSDVLKRK
RLPKRGPRRPKYSPPRDDDKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNIE
PARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRL
CTATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFMKQLLLYLTSKSEKDAVSRD
VRLKRFLHVFFTSPLPGEETVGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAV
RQFSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDSNKDCVGGKRGRAQTAP
TKTSPRNAKKHDELWHDGVCPSISNPLEVYLISLPPENITFEDPSLDVVILLRVLHAISR
YWYYLYDNASCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKSCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLAHPKGS
QEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFY
KWMLRQETSLTSHDLFNIDPVVASSVYHLEEIVRQKKRLEQDKSQTKESLQYALETLTMN
GCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRD
GFESVFPLSHLQYFYPEELDQLLCGSKTDAWDAKTLMECCRPDHGYTHDSRAVKFLFEIL
SSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacagtccaggggggtcactgcgacgttcacaaaggaacact
gtcggggcccaaccgcaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagcccttctgaaagtagaaaatctatatcaaaggcacccaaagtgcag
tccaatactacttctgaacaatccaagggacacttttccaaaagaggctgtagttcatct
gctattataattccacagcaagaggctctggacacagacaatactttggagaggcaaaaa
ttagggcaggtgcctaagaaagacagttctcgaggagtgaaacgcagtgctagcccagat
tacaacagaacaaattctcctagccctgccaaaaaaaccaaagcacttcagcacgctgat
tcttcatcggacttggaaacaagcaagccacaggctaagtcaaagaagagacacttgcat
caagagcaggagtcaaaatcttcacaattaccatcaacaagcaaggctcataccagaaag
ggtggagctactagtagctcccgaagccagaaacggaaaaggacagagacttcacccatt
gtaaagagtcgtccagctgctgaatcgactggcactgaagagagaccagcaaaacccacc
aagctggcttcaaaatcagcgagctcagccaaagctgggtgtagcaccatcacagattcc
tcctcttcagcctctacatcctcctcttcttcggttgttgcatctgcttcttctgctgtt
cctcagggtgccagagtgaaacagggaaaagaccagagcaaggccagacgttccagatct
acatctagccccagtccccggaggagcagccgggacaaagaacagaataagataggtggc
tcttcaaagtttgactgggctgctcgtttcagtcccaaggttagcctgcctaaaacaaaa
ctgtctctcccaggctcttctaaaccggaggcatcaaaacctgggccttcaggattacag
gctaaactagcaagcttgagaaaatcaacaaaaaagcgcagtgaatcgccacctgctgag
ctccccagtttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagt
cggcgaggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaaaatg
gccgatcctgatgataatcaggatggagttaattcttcagctgcgcgagctgatgagact
ccacagggagctgctgcttctagttctgttgctggggctgtgggcatgactacctctggg
gaaagtgaatcagatgattctgagatggggagattgcaagcgctcttggaagctagaggt
cttcctccacatctgtttggtcctctgggtcctcgaatgtcacaactgttccatcggaca
attggaagtggagctagttctaaagctcagcaacttctacaggggctccaggctactgat
gaaagtcaacagttacagtctgtgattgaaatgtgtcagttgttggtcatgggcaatgaa
gaaactttgggaggatttccagtgaagagtgttgtaccagctttgataacattgctgcag
atggagcacaactttgacattatgaatcatgcttgtcgcgccttaacctacatgatggaa
gcacttcccaggtcatctgctgtcgtggtcgatgcaattccggtttttttggaaaagctg
caagttattcagtgcattgatgtggcagaacaagcactgactgccttggagatgttatca
cgcagacatagtaaagctattctacaggcaggaggcttggcagactgtctgctgtatctg
gaatttttcagcataaatgcccagaggaatgcactagctattgctgccaactgctgccag
agcatcactcctgatgagtttcactttgttgcagattctctaccattgcttacacaaagg
ctaacccaccaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgcctagtg
gacaacttccaacacgaggagaatttgcttcagcaagttgcctctaaggatttactcaca
aatattcagcagctcctggtagtgactcctccaattctgagctcagggatgttcatcatg
gtagtgcgcatgttttccctaatgtgctccaactgtcctaccctagcagttcaacttatg
aagcaaaatattgcagaaactcttcactttcttctctgtggagcgtcaaatgggagttgt
caggaacaaatagaccttgttccaagaagccctcaagaactgtatgaacttacttcactt
atctgtgaattgatgccatgtctgcctaaagaaggaatttttgctgtggacactatgcta
aagaaaggaaatgcacaaaacacagatggtgcaatatggcagtggcgagatgaccggggt
ctctggcatccctataacaggattgatagccgtatcattgaggcagcccatcaggttggt
gaagatgagataagtctgtctacactgggtcgtgtttatacaattgactttaattctatg
cagcagatcaatgaggatactggaacagcacgtgccattcagagaaaacctaaccctcta
gccaatactaacactagtggacatccagaactgaagaaggatgatgctcgagcacagtta
atgaaagaagacccagaacttgctaaatctttcattaaaaccttgtttggtgttctctat
gaagtgtacagttcttcagctggacctgctgttagacacaagtgccttagagcaattctt
aggataatttattttgctgatgctgaacttctaaaggatgtgctgaaaaatcatgcagta
tcaagtcatattgcctccatgctgtcaagtcaagaccttaagatcgtagttggagccctt
caaatggcagagatcttaatgcaaaagttacctgacatttttagtgtttactttagaaga
gaaggtgtgatgcatcaagtgaagaatctagcagaatcggaggctttgttgacaagtccc
ccaaaagcatgcactaatggctcaggaacgctaggtgctacaacagcaataagccctgga
acagccactgctgcaagcaatccggcttcagacttgggctctccaagcctgcaacacagc
agggaagactctctggacctgagtccacagggccgattaagtgatgttttgaagaggaaa
agattgccaaaacgtgggccccgacggccaaagtattcacctcccagagatgatgacaaa
gtagacaatcaagctaaaagtcctacagctactcagtctcctaaatcttccttcttggca
agcttgaatcctaaaacctggggaagattaagcacacagtccaatagcaacaacatcgaa
ccagcgcgtacagcaggcgtcagtggtcttgcaagagctgcctcaaaggatacaatatcc
aacaacagagagaaaattaagggttggattaaggaacaagcccacaaatttgtggagcgt
tattttagttctgagaatatggatggaagcaaccctgcactaaatgtgttacagaggctt
tgcactgcaactgaacaactcaaccttcaggtggatggtggagttgagtgccttgtagaa
atccgtagtatagtctctgagtctgatgtctcttcatttgagatccagcatagtgggttt
atgaaacagctgctgctttacttaacgtccaagagtgaaaaagatgctgtaagcagggat
gtcagattgaaaagattccttcatgtgtttttcacttctcctctccctggagaagaaaca
gttggaagattagagccattagaaaatgcacctttgttggctttggtccacaaaatgaat
aattgtcttagtcagatggagcaatttccagttaaagtccatgactttcccagtggaaat
ggaacagggagcagtttttctcttaacagaggatcccaagctttaaaatttttcaacaca
catcagttaaaatgccagttgcaaagacatccagactgtgctaatgtgaaacagtggaaa
ggtggacctgtgaagatagatcctctggcgttggtacaagccattgaaagataccttgta
gttagaggttatggacgagtgagagaagatgatgaagatagtgatgatgatggatcagat
gaggaaatagatgaatctctggctgctcagttcttaaattcagggaatgtgaggcacagg
ctgcagttttatattggagatcatcttctgccatataacatgacagtatatcaagcagtt
aggcagttcagtttgcaggctgaagaggaaagagagtctacagatgatgaaagtaaccca
ctaggaagagctggaatatggacgaagactcataccatttggtacaagccagtgcgagaa
gatgaagatagtaataaagactgtgttggtggaaaaagaggaagggcacagactgctcct
acaaaaacatctcctaggaatgcaaaaaagcatgatgaattgtggcatgatggtgtatgt
ccttcaatctcaaatcctttggaagtttaccttatatctttgccgcctgaaaatataacg
tttgaagatccttcgttagatgttgttattcttttgagagttttacatgctatcagtcgt
tattggtattacctgtacgataatgcaagctgtaaagagattattccaacttcagaattt
ataaacagtaagctcacagcaaaagctaacagacagcttcaagatcctttggtgataatg
acaggcaacataccaacatggctaacagagcttggaaaatcatgtccttttttctttcca
tttgacacccgacaaatgctattttatgtaactgcatttgaccgagatagagccatgcaa
agactgttggacactaatccagaaataaaccagtctgattctcaggatagcagagtggca
ccacgactggacaggaagaagcgcactgtgaaccgagaggaactgttgaaacaagctgaa
tcagtgatgcaggatctgggcagttcgagagctatgctggaaattcagtatgagaatgaa
gttggcacaggtttaggacctacactggagttttatgcacttgtatctcaggaactacag
agagcagacttgggcctttggagaggtgaagaagttactcttgcccatcctaaaggaagc
caagaagggaccaaatatattcataatcttcaaggcctgtttgcacttccctttggcaga
acggctaaacctgctcatattgctaaggttaaaatgaagttccgttttctggggaaattg
atggcaaaagcaattatggattttagattggtggaccttccccttggccttcctttttac
aagtggatgctacgacaggaaacatctctgacatcgcatgacttgttcaatattgatcct
gtagtagccagctcagtataccatcttgaagaaattgtgaggcagaagaaaagacttgaa
caggataaatcacagaccaaagaaagtctacagtatgcattggaaactctaaccatgaat
ggttgctcagtagaagatctagggttggacttcacactacctgggtttccaaacatagag
ctgaaaaaaggagggaaagatataccggtcaccattcacaacttagaagaatatctcaga
ctagttatattttgggcactaaatgaaggtgtttccagacagtttgactcctttagagat
ggatttgaatctgtttttcccctcagtcaccttcagtacttctatcctgaggagctggat
cagttgttgtgtggtagcaaaacagatgcttgggatgcaaagacattaatggaatgttgc
aggccagatcatggttatacacatgacagtcgtgctgtgaaattcctgtttgaaattctc
agtagttttgatagtgagcagcaaagattattcctccagtttgtgactggtagccctaga
ctgccagtaggaggctttcgaagtttgaatcctccccttactattgtacgcaagactttt
gaatctacagaaaatccagatgacttcttaccctcagtaatgacctgtgtaaactatctc
aagttgccagactattcaagtattgagataatgcgtgaaaaactcttgatagctgcaaga
gaagggcagcagtcattccatctttcctga
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integrated database retrieval system
