Hemicordylus capensis (graceful crag lizard): 128348978
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Entry
128348978 CDS
T08891
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
hcg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128348978
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128348978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128348978
03110 Chaperones and folding catalysts [BR:
hcg03110
]
128348978
04121 Ubiquitin system [BR:
hcg04121
]
128348978
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128348978
Chaperones and folding catalysts [BR:
hcg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128348978
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128348978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_1
TPR_16
TPR_2
TPR_14
TPR_CcmH_CycH
TPR_8
ANC1_spectrin
ARM_TT21_C
TPR_7
DUF2383
TPR_11
Motif
Other DBs
NCBI-GeneID:
128348978
NCBI-ProteinID:
XP_053160760
LinkDB
All DBs
Position
3:138714605..138795822
Genome browser
AA seq
2957 aa
AA seq
DB search
MKGFFFAKLYYEAKEYELAKRYISTYLSVQERDPKAHKFLGQLYEAEKNLEKAVGCYKRS
VELNPTQKDLVLKIAELLCNNDITDGRAKYWVERAAKLFPGSPSVFHLKECLLDCEGEEG
WNQLFDLIQTELYARPDDVHVNIRLVQLYMSNKRLEDAVLHCQEAEKKLSLQSSLEWCLC
VVQTLEEYLKSAQNSESDKISWQRTHRDLLLAYSNVVVMTLSSRSVEASRASLESFDHAL
HSVKPYVAGGELSVTFLEMRGHFYMHAGTLLLKMAQQSEAQWRAVSELAALCYLIAFQVP
RPKSKLIKEDKAERETLQMLACDRQSQSGHMLLNLSHGKQDFFKEIVESFANESGQSTLF
DALFRSGSRESSFLGTDDIRNVGVQAPDCMELTRYDIGAIRLHNGSLQHLTWLGLQRHSL
STQQAIRKWLKQLFNLPQETSRLETNEPESICMLDLEVFLLGVIFSSHLQLQGKHNTQHS
VHQPRLLPLPVCKQLCTERQKAWWDSVYNIIHKPAVSGSAAKMRLIVQHEISILRALGKH
GLQPALIIHWAKSLLKTGCSLNSFYDQREYIGRSIYYWKKVLPMLETIKKKKSIPEPIDP
LFKHFHSEDIQASQVDECQEEAHIAFAMLDAVDGKTDDAMQAFEAIKSVVSYWNLALIFQ
RKAEEMENDGLSLEEQEECRNHLKKSRDYLIKIIDESSTNTAVIEKLPVSVEVVKEMLES
VMQELGDNDEGRSPTFNNDLNQPAETEIKHSTPSPTKFSLSPSKSYKFSPKKPPRWAEDQ
KSLLQMICQQVESIKTEMQEMKLNNSNANLSHRWPAESYAPDTMSDGYQGAQNFHGAPLT
VATTGPSVYYNPSPAYNSQYLLRTAATNVTPTKAPVYAMNRLTPQQHIYTYQQPMHTPPL
QNTSACMFSQDMYGTPLRFDSPATGILSPRGSEDYYNYSVPPTSTNPPLPEPGYFTKPSA
APPVSRPAESKVIEFGKPNFGQSIPAEGTKPSSQSAQPTTFKFNSNFKSNDGDFTFSSPQ
VITQSHSTTYGNNDSLLDLLTSDKPIKEDRYTGQKPLAEQATGQRNIFSFGGKNTSSISL
TDKMAQSQPQLSVFGKSDVFSFQDPSKPMFGTQSSDVANRSHDGDGSVHGGDEDDDGPHF
EPVVPLPDKIEVKTGEEDEEEIFCNRAKLFRFDGECKEWKERGVGNVKILRHKITGKIRL
LMRREQVLKICANHYINTDMALKPNAGSDKSFVWHALDYADELPKPEQLAIRFKTPEEAM
LFKRKFQEAQNSLKASGSNVSEQAIHNMGSTRERTTQDAKDSGKSDTGILNTGFHLKSGA
SSINGSCQVLGPDTINTAKNTNTKSTFTITSSGSTPTSSSFGKEVAATCGFGDKFKLKEG
QWECNTCLVRNLITSQKCVACQAPNPSKEALPPPTEPAVSFKPSTEGTFGLISAKKEKQW
ECKNCLVRNEGSVSHCIDCKNPSGTKASVFGPQTTFKFGQAETPVAPQSTFGAAFLKKEG
QWDCNVCLVQNESDSATCVACQAPNPCDIAPAVPANAQSPAFAFKSKLSESTGGPQGTGF
KCEISEKGFKFGHLTEQGKSPFSFQLPPSTETKPVKGGFNFSMPVPPGGFKFGIQEPSKD
IAKDEKKKEGNFVKGLDERELSSAEETVVQSHDASGKQSSDLPFGQHSSTFTFADLAKTT
GEGFQFGKKDPNFKGFTGAGEKLFSSQTTKSSSKANTSADLEKEEDAYKTEESDDIHFEP
VVQMPEKVELVTGEEDETVLYSQRVKLFRFDADTSQWKERGVGNLKILKNEVNGKLRMLM
RREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPEQAEEF
KHKFEEYQRLLLDIPLQTPHKLIDTGKTAELIQKAEEMKSGLKDLKTFLTDDKTKLADEE
EKSSVAAASTSDLIIKPHAESTGPTLEWDNYDLRGEALDDSTDSSVYALPRASSPVRKNL
FRFGESTTGFNFSFKSALSPSKSPSKQNQSRTSIGTDEESDVTQEDERDGQYFEPVVPLP
NLVELKSGEENEQVAFSHRAKLYRYDKDTNQWKERGIGDIKILQNYDTKQVRIVMRRDQV
LKLCANHRITPDMNIQQMKGTERAWVWTACDFAEGERKMELLAVRFKLQDVADCFKQIFE
EAKHAQEKGTLVTPLSSRTNTPKESPCGKTAVAVLEETTRERTDLKEDEETVIQTGDTSV
VVVTSEMPTKAVVSPPKFVFGSESVKSIFNNEKSKPFTFGNTSATGSLFGFSFNAAPKSK
SDSLISQTTLQREAESTHGTVNFGVAGHQEGSTAGWKHLDDKGEIQAATSKVEGPSNFSF
KLVEKVETKKEPDTTISDVFIVYELTPTPEQRALADSLRLPPTFFCYKNKPGYLSEDDDD
EDFETAVKKLNGKLYPEEPQQHTQPQGTDTGIIKENESEGGSECVLVWEKKPTPEEKAKA
ENLKLPPTFLCDIGSDTGEDNDDSLEDFQTELAKVQETKEAQVEDVTSSTDDMCTTKKDE
GPVVMASITEEPDSTTEPTHIIQALLETDDKPVDLSTKKESNSTFTGSVNQETKPFSFAF
GNKPGLSFADLASNNSGDFAFGSKDKNFKWANTGATVFGVQAATKENNEDDGSDEEVVHS
DDIHFEPIVSLPEVEVKSGEEDEEIIFKERAKLYRWDREVNQWKERGVGEIKILFHTQKK
CYRVLMRRDQVLKVCANHIITKNIDLKPLNTSNNAMVWTATDYADGEAKIEQLAVRFKSQ
ELADSFKRRFEECQQSLSELQRGHRSLAAELSNETNPVVYLEVSADDEHLGRITIELFSN
IVPQTAENFRALCTGEKGFGFRNSIFHRIIPDFMCQGGDITKQDGSGGRSIYGDLFEDEN
FEVKHTGPGLLSMANNGRNTNNSQFFITLKKAEHLDCKHVVFGFVKDGMDVVKKMEYSGS
PGGAVSKRIVITDCGQI
NT seq
8874 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggattcttttttgctaagctgtattatgaagcaaaggaatatgaacttgctaaa
aggtacatatctacatatctcagtgtccaagaacgagatccgaaggcccacaaattctta
ggccaactctatgaagctgaaaagaacctagagaaagctgttggctgttataagcgttca
gtggaattgaacccaacacagaaagatctcgtattaaagattgcagaattgctgtgcaac
aatgatattactgatgggagagcaaaatactgggttgagagagcagccaagctctttcct
ggaagtccttcagtttttcatctgaaggagtgtctgttggattgtgaaggtgaagaaggg
tggaatcagctttttgacttgattcagacagagttgtatgctagaccagatgatgtacat
gttaacatcagacttgtacagctatacatgtcaaataaaagactcgaagatgctgtgtta
cattgtcaagaagcagagaagaaactatctttgcagtcaagcttggagtggtgcctgtgt
gtggtacagacacttgaggaatatctgaaatctgcacagaactctgaatctgataaaatt
agttggcaaaggacccatcgggatctcttgttggcttactccaatgtggttgtaatgaca
ctatcaagcagaagtgttgaagcaagtagagcatctcttgaaagctttgatcatgcactt
cattccgtgaaaccatatgtagctggaggtgaactgtctgtaactttcctggaaatgaga
ggccatttctacatgcatgctggaactttgctgttgaagatggcccagcagagtgaggcg
caatggagagctgtttctgaattggcagccttgtgttaccttatagctttccaggttcct
agaccaaagtcaaaactaataaaagaagataaagctgaacgagagacgttgcaaatgtta
gcctgtgaccgacagagccaatctggacatatgctgctgaatttaagtcatggcaagcag
gatttcttcaaggagattgttgaatcatttgcaaacgagagtgggcagtccactttattt
gatgcactgtttaggagtggttctagagagagctcattccttggcacagatgatatccga
aatgttggtgtacaagcaccagattgcatggaactgactagatatgatattggtgccatt
agattgcacaatggtagtctccagcacctcacatggcttggtctgcagcggcactcctta
tcaacacagcaagcaattcgcaaatggttaaagcaacttttcaatttgcctcaggaaacg
tcaagacttgagaccaatgagcctgaatcaatttgcatgttagaccttgaagtatttctg
cttggggtgatattcagcagtcatttgcaattacaagggaagcataatacacagcacagt
gtacaccaacctcgattgcttccactaccagtatgcaagcaactttgtactgaaaggcag
aaggcctggtgggattcagtttataatattattcacaaaccagctgtatctgggtcagca
gcaaaaatgagacttatagttcaacatgaaataagcatcctaagagctttaggaaaacat
ggtcttcaaccagctctgatcatacactgggcaaaaagtctccttaaaacaggctgcagc
cttaattctttctatgaccaacgggaatacattggacgaagcatatattattggaagaaa
gttctgccaatgcttgagacaatcaagaagaagaaaagtattcctgaaccaattgaccct
ttgttcaaacattttcatagtgaagatattcaggcttcccaggttgatgaatgtcaagag
gaagcacacatagcatttgctatgctggatgccgttgatgggaaaacggatgatgctatg
caagcatttgaagctattaaaagtgttgtttcatactggaaccttgctctgatctttcag
aggaaggctgaagagatggagaatgatggcctgtcactagaagagcaagaagaatgtagg
aatcacctaaagaagagcagagactacctcataaaaataatagatgaaagcagcacaaat
acggcagtaattgaaaagttacctgtatcggtagaagtggttaaggagatgctggaatct
gtaatgcaagaacttggggacaatgatgaaggaagaagtcctacctttaacaatgatctg
aaccaaccagcagaaacagaaattaaacattccaccccatcacccacaaaattctcactg
tctccaagtaaaagctacaagttctctcccaaaaaacctcctcgctgggcagaggatcaa
aaatctctacttcagatgatctgtcaacaagtagaatctattaagactgagatgcaagaa
atgaaacttaacaattccaatgcaaacctttctcatcgatggcctgctgaaagctatgca
ccagataccatgtcagatggctatcaaggagcacagaacttccatggagcaccattaact
gtggctactacaggtccatcagtctactacaacccatcaccagcgtataattctcagtat
cttctacgaacagcagccaccaatgtgacccccacaaaggctcctgtctatgccatgaat
agacttacacctcagcaacacatttatacatatcaacagccaatgcatacccctccactt
caaaacacttctgcttgtatgttttcacaagacatgtatggtactccactacgttttgat
tctcctgcaacaggaattttgtctccccgtggtagtgaagattactacaattatagtgtt
cctccaacaagcacaaatccaccactgcccgagccaggctatttcacaaaaccttcagca
gcaccgccagtttcaaggcctgcagaatcaaaggtgatagaatttgggaagcctaacttt
ggtcaatctataccagcagaaggcacaaaaccttcttctcaatcagctcagccaactacc
ttcaaatttaactctaacttcaaatctaatgatggtgattttactttttcatctcctcag
gtcataacacaatcccatagtacaacctatggcaacaatgacagtcttttggatcttctg
acatcagacaaacctatcaaagaggatcgatatacaggacaaaagccacttgctgaacaa
gccactggacagcgcaatatcttcagttttggtggcaaaaatacttcaagcatttcactt
acagataaaatggcacaaagtcaaccccaactctctgtgtttggtaaaagtgatgtgttc
agctttcaggatcctagcaaacccatgtttggaactcagagttcagatgtagcaaacaga
agtcatgatggagatggaagtgtccatggtggtgatgaagatgatgatggtcctcatttt
gaacctgtagtgccactacctgacaagattgaagtaaaaacaggtgaggaagatgaagaa
gagatcttctgcaacagagccaaactctttcgttttgatggggagtgcaaagagtggaaa
gagagaggagttggtaatgtgaaaattctgaggcataaaataactggcaaaattcggctg
cttatgagacgggaacaagtgctgaaaatctgtgcaaatcactatataaatacagatatg
gccctaaagccaaatgctgggtcagacaaatcatttgtgtggcatgccttggactatgca
gatgaattaccaaaacctgagcaactcgccattagatttaaaacaccagaggaagcaatg
ctgttcaagcgtaaatttcaagaggcacaaaatagtttaaaagcctctggatcaaatgtt
agtgaacaggccattcacaacatgggatcaacaagggagagaactactcaagatgcaaaa
gattctgggaaatctgatacagggatcctgaatactggattccaccttaagagtggagca
tcctctattaatggcagctgtcaggttcttggtcctgatacaatcaatacagcaaaaaac
accaataccaaaagcacatttaccattacatcaagtgggtcaacacccacatcctcttct
tttggtaaagaagtagctgcaacatgtggctttggcgataaatttaagctcaaggaaggt
cagtgggaatgtaatacatgcttggttaggaacttgataacttcacagaaatgtgttgct
tgccaggctccaaatccatctaaggaggctctgcctcctccaacagaaccagctgtctct
ttcaaacctagcactgagggtacatttggactcatttctgctaaaaaggaaaaacagtgg
gaatgcaagaactgtttggtcagaaatgaaggcagtgtatctcattgtattgactgcaaa
aatcccagtggaactaaagcatcagtatttggtccgcaaaccacattcaagtttgggcag
gcagaaacaccagtggctccacaaagtacctttggggctgcttttttgaaaaaggaaggc
cagtgggactgcaatgtatgtttagtccaaaatgaaagcgattcagctacttgtgtagct
tgtcaagctccaaatccatgtgatattgctccagctgtacctgctaatgctcaatcacct
gcatttgccttcaaaagcaaattatcagaatccactggaggaccacaggggacaggtttt
aaatgcgagatatcagagaagggctttaagttcggccatcttacagagcaaggaaagtct
ccgttctcatttcagcttcctcctagtacagaaactaagcctgtgaaaggagggtttaat
ttttcaatgcctgtaccgccaggtgggtttaaatttggtatacaagagcctagcaaagat
attgcaaaagatgaaaagaaaaaagaaggtaattttgtaaaaggccttgatgagagagaa
ttgtcatctgcagaagaaaccgtggtacagtctcatgatgcatctggcaaacagagtagt
gacttaccttttggccaacatagcagcacattcacttttgctgaccttgcaaaaacaact
ggtgaggggtttcagtttggcaaaaaagatccaaatttcaagggttttacaggtgcaggt
gaaaagctcttttcttctcagaccactaaaagttcttccaaagcaaatacttctgctgat
cttgagaaggaagaggatgcatataaaacagaagagagtgatgatattcattttgagcct
gttgtccagatgcctgaaaaagtggaactagtgacaggggaggaggatgagacagtgctg
tattcgcaaagagtaaagctattcaggtttgatgcagataccagccagtggaaagaacgt
ggtgtgggcaacttgaaaatccttaagaatgaagttaatggcaaactacgaatgctcatg
aggcgtgagcaggtactgaaggtttgtgcaaaccactggatcacaactaccatgaacttg
aagccactctctggctcggacagagcatggatgtggttagccagtgacttttctgatggt
gatgcaaagctggaacaattggcagctaaattcaaaactccagagcaggctgaagaattc
aaacataaatttgaagaatatcagaggctgttgctggatatcccactccaaaccccacac
aaactcattgatactgggaaaacagcagagctcatacagaaggcagaagaaatgaaaagc
ggattaaaagatcttaaaactttcctgacagatgataaaactaaacttgccgatgaagaa
gagaagagctctgttgctgctgcaagcacttccgatttgattataaagccacatgctgaa
agcaccgggcctacattggaatgggacaactatgacttgcgtggggaagcactggatgat
agtacagatagttctgtgtatgcactgcctcgggccagtagtccggtgagaaaaaatctg
tttaggtttggggagtctacaacagggtttaactttagtttcaaatctgcactgagtccc
tccaagtctccttccaaacagaaccaaagcaggacttctataggcacagatgaggagtcc
gacgttacccaagaagatgaaagagatggtcagtactttgagcccgtggtccctttaccc
aaccttgtagaactaaaaagtggtgaggaaaatgagcaagttgccttcagtcatcgggca
aaactgtatagatatgataaagatactaatcagtggaaagagagaggtattggggatata
aaaattttgcagaactatgacactaaacaagttcgcatagtcatgagaagagaccaggtg
ttaaagctttgtgccaaccatagaataacaccagatatgaatatacagcaaatgaaaggc
acagagagagcttgggtatggactgcatgtgactttgctgaaggagaaaggaaaatggag
ctcttggctgtacgatttaagctgcaagatgttgctgactgtttcaaacaaatttttgag
gaagcaaaacatgctcaggaaaaaggcaccttagtcacaccactctcttcacgcaccaat
accccaaaagaatctccatgtggaaagactgctgttgcagtattggaagaaaccacaagg
gagaggacagatctaaaggaggatgaagaaactgttatacagacaggagacacttcagtg
gtggtggtaacttctgagatgccaacaaaagcagtggtttcaccacccaagtttgttttt
ggctcagaatctgtcaaaagtatttttaacaatgaaaaatcaaagcctttcacatttgga
aacacttcggcaacagggtctctctttggcttcagtttcaatgctgctcctaaaagtaaa
agtgatagcttgatttctcaaaccacactacagagagaagcagagagcacacatggcact
gtaaactttggagttgctggacatcaggaaggtagcactgctggctggaaacacttggat
gacaaaggagaaattcaagcagctacctcaaaagtggaaggaccttctaacttctcattt
aaactggtagaaaaagttgagactaagaaagaaccagatacaaccatttcagatgttttt
attgtatatgaattaacaccgactcctgagcaaagagctcttgcagactcccttagatta
cccccaacgttcttctgctacaagaacaaacctggatatctgagtgaagatgatgatgat
gaggactttgaaacagcagtgaagaaacttaatggaaaattgtatcctgaggaaccccag
caacacacacaaccacagggaactgacacaggtatcataaaagaaaatgaatcggaaggt
gggagcgagtgtgttcttgtctgggaaaagaaaccaactcctgaagaaaaggctaaagca
gagaatctgaagcttcctccaacctttctctgtgacattggcagtgacactggtgaagac
aatgatgacagcttagaagattttcaaacagagcttgccaaagttcaagaaactaaagaa
gcccaagtcgaagatgttaccagttcaacagatgatatgtgtactactaagaaagatgaa
gggccagttgtcatggccagtataactgaagaaccagattcgactacagaacctacacac
atcatacaggctttattggaaacagatgataaacctgttgacttgtcaactaaaaaagag
agcaactcaactttcacaggctctgtaaaccaagaaaccaaacctttctcatttgccttt
ggcaacaaacctggcttgtcatttgctgatctggcttcaaataattctggggatttcgct
tttggttcaaaagacaaaaatttcaagtgggcaaatacaggagcaactgtatttggagta
caggcagccactaaagaaaataatgaagatgatggaagtgatgaagaggttgtacatagt
gatgatattcactttgaaccaattgtatcccttccagaggttgaggtgaaatcgggagaa
gaagatgaagaaattatctttaaagaaagggcaaaactctacagatgggacagagaagtc
aatcagtggaaagaacgtggtgtgggagaaataaagatcctcttccatacacagaagaag
tgttatcgagttttaatgagaagggaccaagttctcaaagtctgtgcaaatcatataatc
acaaaaaacatagatttaaaacccttgaatacttcaaacaatgctatggtttggactgct
acagattatgctgatggtgaagcaaaaatcgaacagcttgcagtcagatttaaaagccaa
gagctggctgattccttcaaaaggagatttgaagagtgccagcaaagcttgtcagagttg
cagaggggacatagatccctggcagcagaattgtcaaatgaaactaaccctgtggtatat
cttgaagtttctgctgatgatgaacacctgggtcgtatcaccatagaactattttctaat
attgttcctcaaactgctgagaacttcagggcattatgcacgggagaaaaaggatttgga
ttcagaaattcgatatttcacagaataattccagattttatgtgtcagggaggtgatatc
actaaacaggatggttcaggtggtcggtcaatttatggagatttatttgaggatgaaaat
tttgaagtgaaacacactggtcctggcttactttccatggcaaataatggtagaaacacc
aataattctcaattctttattacactcaaaaaggcagagcatttggactgtaaacatgta
gtcttcggctttgtgaaggatggtatggatgttgtaaaaaaaatggaatattctgggtct
cccggaggagcagtatcaaaaagaattgtgatcacagactgtgggcaaatataa
DBGET
integrated database retrieval system
