Hemicordylus capensis (graceful crag lizard): 128349228
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Entry
128349228 CDS
T08891
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128349228 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
Other domain-containing proteins
Patched domain-containing proteins
128349228 (PTCHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
128349228
NCBI-ProteinID:
XP_053161240
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All DBs
Position
3:complement(111268291..111604382)
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AA seq
942 aa
AA seq
DB search
MVLPRLWESFRFHRARLALLSCFCTRMLRQVLHRGLRTSFARLGHFIASHPVFFASAPVL
ISILLGASFSRYEIEESVEHLLAPKHSLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFVKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKSCIVDDIV
HVLKELKAAHLSNQTNFAITYPITRLKDGREVYNGHQLGGVTVHSKDQVKSAEAIQLTYY
LQAINAMNDKVAEKWESNFCDTVELFQKSNRNVTMYPFTSSSLQEDFQKTSRVSERYLTT
SLALVVTLAMLCCSMQDCVRSKPWLGLLGLLTVSLATLTAAGIINLTGGKYNSTFLGIPF
IVLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLFVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTAKFSEDTTESEETNSYESHLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISF
ALMGYLQVNEESDLNNIVATATRTMEYTAAQQKYFSNYSPVIGFYIYESIEYWNMTVQDD
MLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYRLLETLRKLSLKSKVKFIVFNPSFVYMDRYAS
YVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTVDNCAPLLSTFVLGKDFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKTPENREEIESQWML
NEMDCTSVNERVKATQITFLIWDSRCKKTEDLRIWTQHAHFD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcctcgactctgggagagcttcagattccatcgtgcgcgcctcgccctcctg
agctgcttctgcactagaatgttgcggcaggtcttgcacagggggctgagaacgtctttc
gctagactcggccacttcattgccagccacccggtcttcttcgcctccgcacctgtgctc
atctccatcttgctgggggccagtttcagcaggtacgagatcgaagagagcgtcgagcac
ctgctggcccccaaacacagcctggccaagatcgagaggaacctggtcaacagcctcttc
cccgtcaaccgctccaagcaccggctctattccgacctgcagacccctgggagatacggc
agggtcatcattacatcctttgtgaaggcgaacatgctggaccagcaccacaccgacctg
atcttaaagctgcactctgctgtgaccagaatccaagtgcaaagacctggtttcaattac
acatttgcccacatctgcatcctaaataatgacaagtcttgcatagtggatgacattgtg
cacgtcctgaaggaactgaaggctgctcacttgtccaatcaaactaattttgctattaca
tatccaatcacacgcttgaaggatggcagggaggtgtacaatgggcaccagcttggtggg
gtcactgtgcacagcaaagaccaggtgaagtctgctgaagccatccagctcacctactac
ttgcaggcaattaacgccatgaatgacaaagtggcagaaaaatgggaatccaacttttgc
gacactgttgaactttttcagaaatccaacaggaatgtcacgatgtatcccttcacttca
tcatctcttcaggaggacttccagaagacaagcagggtgtcagaacgttatctaaccaca
agcctggctcttgtggtcactttggccatgctgtgttgttccatgcaagactgtgtccgc
agcaaaccctggcttggcctccttgggttgttaactgtgagcttggccactctcactgca
gctggaatcattaatctaactggtgggaaatacaattctaccttcctgggaattcccttc
atcgtgttaggtcatgggttatatggaacatttgaaatgttgtcctcctggaggaaaacg
agagaagaccaacacgttaaagagaggactgcagctgtatttgcagactccatgctctcc
ttttctctcaccactgccatgtacctggtcacttttgggataggtgccagccccttcact
aacattgaagcagcaaggatcttctgctgcaattcctgtattgcaattttcttcaactac
ctctttgtactctccttttatggttccagcctcgtgtttactggctacatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaaacct
gcctggtataggtttcttctgacagccaaattcagcgaggacacaacagagtcagaggaa
acaaacagttacgaaagtcaccttttggtgtgttttctcaagcgttattactgtgactgg
ataacgaatacttacgtcaagccttttgtagttctcttttaccttatttatatttccttt
gccttaatgggctacctgcaggtcaatgaagagtcagacctgaataacattgtagcaact
gcgacacgaaccatggagtatactgctgctcagcagaagtacttcagcaattacagccca
gtcattgggttttatatttatgaatcaatagaatactggaacatgaccgttcaagatgac
atgctagagtacaccaaggggtttgtgaggatatcttggtttgagagctacttaaattac
cttagaaaactcaacatatccactggattacccaaaaagaattttacagatatgctgagg
aactccttcctgaaagccccccagtttgcccatttttctgaggatatcattttttccaag
aagtataacaatgaagttgatgtcgtagcctctagaatgttcttggtggctaagacaatg
gaaaccaaacgagaagagctttatcgtctcctggaaaccttaagaaagctctctctcaaa
tcaaaggttaaattcattgttttcaacccatcatttgtatacatggatcgctatgcctca
tatgtgggggcccccttgcagaactcctgcatcagtgctttattcctgctcttcttctct
gcatttctggtggcagactctctcatcaacgtatggctcacgctcactgttgcctcagtc
gaatttggagttataggttttatgaccctgtggaaagtagaactggactgtatttctgtg
ttgtgcttaatttatgggattaattatacagttgacaactgtgcacctctcttgtcaaca
tttgtcctgggcaaagatttcacaagaactaaatgggtaaagaatgccctggaagtgcac
ggggtagctattttacagagctacctctgctatattgttggtctgattcctctcgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttgatagcattagtcacc
ttctttcattgctttgccattttacctgtgatactgacttttctgccaccgtccaagaaa
aagaggaaagagaagaaaactcctgagaacagggaggaaatagaatcccagtggatgctg
aatgaaatggactgtacatctgttaatgagagggtgaaagccacacagattacttttctt
atatgggacagtagatgcaaaaaaactgaggatcttaggatatggacacagcatgctcat
tttgactga
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