Hemicordylus capensis (graceful crag lizard): 128349359
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Entry
128349359 CDS
T08891
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128349359 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128349359 (WDR33)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128349359 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Collagen
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
128349359
NCBI-ProteinID:
XP_053161466
LinkDB
All DBs
Position
3:290691475..290814674
Genome browser
AA seq
1303 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDLAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLPVIPGMGIPEQLKLAMEQEQMGKDETSEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPAEPLNDRKEDLKLEEKKKSQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQGQQQPPPGGPVHGPQHFPGQGPMSQVPQG
FQQAHPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPIHQGGGGPQGFAGPQGPPQ
GLPRPQELHGHQGMQRHPGPHGPMGPPGPPGPQSNSGPQGHLGPQGPPGPQTHLGQQGPP
GPQGHIGPQGPPGGQGPPGPRGMQGPHGVQGAQGPVSQGPLMGLNPRGMQGPPGPRENQG
PGPQGMMMGHPPQEMRGPHGLLGHGPQEMRGPPPQGSMMGPPQELRGPPGAQGQQGPPQG
AMAGPQGNMQGPPGPQGQQNPSRGPHPSQGPPPFQQQKTPLLGDGPRAPFNQEGQNPGPP
PLIPGLGQHGGPGRHGPHNQGPGPNKGDSRGPPNHHMGPISERRHDQNSGGPDHGPERGP
FRGGQEWGDSRESRGMPDRRGPHPDFHDDFDRPDEFRDDFHQDKRFGHRLREFEGRGGPP
QEEKWRRGGPGPPFPADHREFNEGDGRGPNRGPPGPWDGRRPSDERFSHDPEDSRYRGRR
DESFRRGTPSRHESRGPRGRDSFSGPDDFVPEDNFDSSEENARGRDHSGRGRGRGTPRGG
RKGLLPTPDEFPHFEGGRMDGNREPGPRQDHPPHDGHSPASRERSSSLQGMDMASLPPRK
RPWHDGPGTSDHREMDIQGGPPEERGKGRGKSGPSQRMSKSGRSSSLDGDHHDGYHREEA
FGGPPGGNNPSRGGRSGSNWGRGSNMNSSQSRRGASRGGGRGR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggccacagagattggctcaccaccgcggtttttccatatgccgaggtttcagcaccag
gcacctcggcagctattctataagagacctgatcttgcccagcagcaggcaatgcagcag
ctcacctttgatggaaaacgtatgagaaaagcagtgaaccgaaaaactatagactacaat
ccttctgtaatcaaatatttagagaatagagtatggcaaagagaccaacgggatatgcgt
gcaattcagcctgatgcagggtattacaatgatctggtcccacctataggaatgttgaac
aatcccatgaatgctgtaacaacaaaatttgttaggacatctacgaataaagtaaaatgt
ccagtgtttgttgttaggtggactcctgaaggaagacgcttggtcactggagcttctagt
ggagagttcactttatggaatggactgactttcaactttgaaacaatattgcaggctcat
gatagtccagtaagggctatgacttggtcacacaatgatatgtggatgttgacagcagac
catgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacctacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggtgctgatgtcaagtgtgttgactggcatccaacaaagggcttggtggtt
tctggaagtaaagatagtcaacagccaatcaagttctgggatccaaagactggtcagagc
cttgctacactacatgctcataaaaacacagtaatggaggtcaagttgaatctaaatggc
aattggctacttacagcatctcgtgatcacctctgcaaactctttgatatccgaaacttg
aaagaagagcttcaggttttccggggtcataagaaggaggccacagctgtggcctggcat
cctgttcatgaaggcctttttgctagtggagggtctgatggctccttgctgttctggcat
gttggggtggaaaaagaagtaggtggtatggaaatggcccacgaaggaatgatctggagt
ctggcatggcatccacttggacacattctgtgctcaggatcaaatgatcataccagcaaa
ttctggacccgcaatcgtcctggagataaaatgcgagatcgttataatttgaacctgctt
ccaggaatgtcagaggatggagtggaatatgatgacctggaacccaatagtcttccagtg
attccagggatgggaatacctgagcaactgaaactagccatggaacaagagcagatgggg
aaagatgagacaagtgaaattgagatgactatcccaggattggattggggaatggaagag
gtgatgcaaaaggaccaaaagaaagtaccacaaaaaaaagttccctatgcaaaaccaatc
ccagcccagtttcagcaggcttggatgcagaataaagttcccatccctgcacctgctgag
ccactgaatgaccgaaaggaagatcttaaattggaagagaaaaagaaatcacaggcagag
attgagcaagagatggcagcacttcagtacaccaacccacagcttctggagcaactgaag
attgagaggcttgcccaaaagcaagcagagcaaggtcagcagcagccacctccaggagga
cctgtgcatggaccacagcatttcccgggacaaggtccaatgagtcaggtgcctcaaggc
tttcagcaggctcatccacctcagcagatgccaatgaatatgcctcaaatgggaccacct
gggccacagggacagttcaggcctccaggacctcaagggcaaatggggcctcaaggtcct
cctatacaccaaggaggtggcggcccacaagggtttgctgggccacaaggaccaccacaa
ggattgccacgacctcaagagcttcatggacatcaaggaatgcagagacatcctggtcct
catgggccaatggggcctccaggaccacctggaccacagagtaattctgggcctcaaggt
cacttaggcccgcaaggtccacctggccctcagactcatttaggtcaacaaggcccacct
ggaccacaaggccacataggtcctcaaggtccacctggtggtcagggaccacctggccca
agaggaatgcaaggacctcatggagtgcaaggagctcagggtcctgtatctcaagggccc
ttgatgggacttaatcctagaggcatgcagggacctccagggccacgggagaaccaggga
cctggtccacaggggatgatgatgggtcatccaccacaagaaatgagaggacctcatggt
ttattgggacatggcccccaggagatgaggggccccccacctcagggttcaatgatggga
ccgccgcaggaattacgtgggccaccaggtgcacaaggacagcagggacctccacaaggt
gctatggcagggcctcaaggaaatatgcaagggccacctggtcctcaaggacagcagaac
ccttcgagggggccacatccttctcaaggccctccacctttccagcagcagaaaactccc
ttgcttggtgatggtcctcgggccccattcaatcaggaaggacagaatccaggtccccca
ccattgataccaggactggggcagcatggaggacctggccgtcacggccctcacaaccaa
ggtcctggtcctaataaaggtgattctcgtggtccaccaaaccatcacatgggccctatc
tcagaacgaaggcatgaccagaacagtggtggcccagatcatggcccagagaggggcccc
ttccgaggtggccaagaatggggtgacagtagagagagcagaggcatgccggatagacgg
ggacctcatccagatttccacgatgactttgaccgaccagatgaattccgtgatgatttc
catcaggacaaacgatttggccaccggttacgtgaatttgaaggacggggaggcccgcct
caagaagagaaatggaggcgaggtggtccaggccctcctttccccgctgatcacagggaa
ttcaatgagggagatggccgggggccaaaccgtggacctcctggaccttgggatggacgg
aggccttcagacgaacggttttctcatgaccctgaggattcacggtaccggggaagacga
gatgaaagtttcaggagaggcactccctcaagacatgagagccgaggtcctaggggaagg
gacagtttttctggacctgatgactttgtgccagaagataattttgattcatcagaggag
aatgcaagaggaagagatcatagtggccgtgggcgaggtcggggtactccaagaggggga
cgaaaaggtctgcttcccactccagatgagtttcctcactttgaaggaggccgaatggat
ggaaatcgagaaccaggtcctcgccaggatcaccctcctcatgatggtcattctccagca
agtagagaacgttcttcctcactccagggaatggatatggcctcactgccacctcgcaaa
cgtccttggcatgatggaccagggacctctgaccatagagaaatggacattcaaggtggg
cctccagaagaaagaggaaaggggcgtgggaaatcaggtccttcacagagaatgtctaaa
tctggaagatccagctctttggatggagaccaccatgatggatatcatagagaagaagcc
tttggaggacctccaggaggcaataacccttccaggggaggaagaagtggaagtaactgg
ggaagaggaagtaacatgaactcaagccagtcaaggcgaggagcttctagaggtggtgga
agaggtcgatag
DBGET
integrated database retrieval system
