Hemicordylus capensis (graceful crag lizard): 128349738
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Entry
128349738 CDS
T08891
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04510
Focal adhesion
hcg04520
Adherens junction
hcg04810
Regulation of actin cytoskeleton
hcg04820
Cytoskeleton in muscle cells
hcg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128349738 (VCL)
04520 Adherens junction
128349738 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128349738 (VCL)
04810 Regulation of actin cytoskeleton
128349738 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128349738 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcg04812
]
128349738 (VCL)
04147 Exosome [BR:
hcg04147
]
128349738 (VCL)
Cytoskeleton proteins [BR:
hcg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128349738 (VCL)
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128349738 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
128349738
NCBI-ProteinID:
XP_053162549
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All DBs
Position
3:198748739..198924806
Genome browser
AA seq
1140 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPHAPAGDSGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQLTDQVADLRARGQGATPLATQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDSAQSWLADPNGGSEGEEHIRGIMAEARKIA
ELCEDPKERDDILRSLGEISALTAKLSDLRKHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANSRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKSRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKSTVE
GIQATVKSARELTPQVVSAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKF
REAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKNFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLNQPMM
MAARQLHDEARKWSSKPDVTEVKEAPEADVDVDQEEEEEEADVEFTLPSDIEDDYEPELL
LMPTNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRA
LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATML
GRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacccgcacgatcgagagtatcttggagccggtggcgcagcagatc
tcccacctggttatcatgcacgaagagggagaggtggatggtaaggccatcccggatctc
accgctccagtagccgctgtgcaagccgccgtcagtaacctggtccgggttggaaaagaa
actgttcagacaactgaagaccagattttgaagagagacatgccaccggcattcattaaa
gtggaaaacgcgtgcacgaaacttgtccaggcagctcagatgctccaaactgatccttat
tcagtacctgctcgtgattacctcatagatggatcgagaggcatcctttctgggacatca
gatttacttctgacatttgatgaggctgaggtccgcaaaatcatccgtgtttgcaaagga
attctcgaatacctaactgtggcagaggtggtagagactatggaggatctggtgacctac
acaaagaatctggggccaggaatgaccaagatggccaaaatgattgatgaacgacagcaa
gagctgacgcaccaggaacacagagtcatgttggtgaattccatgaatactgtaaaggaa
ctgctgcctgtccttatttcagctatgaagatttttgtaacaactaaaaattccaaaagt
caaggaatagaagaggccttgaaaaaccgcaactttacggtggagaagatgagtaccgag
ataaatgaaataattcgtgtgttgcagctcacatcctgggatgaagatgcttgggccagc
aagaaggacacagaagccatgaagagagcattggccttaatagattccaagatgaaccag
gctaagggctggcttcgggatccccacgctccagcaggagattctggtgaacaggccata
aggcagatcctggatgaagcaggaaaagttggagagctgtgtgcaggcaaagaacgaaga
gagatcctgggaacctgtaaaatgctaggccaattaactgatcaagttgctgaccttcga
gctagaggacaaggtgctacaccactggccacgcagaaggcacagcaagtgtcccaaggt
ctggatttactcacagcaaaagtagaaaatgcagctcgcaagctggaggccatgactaac
tcgaagcaggcaattgcgaaaaaaattgattctgctcagagctggctagcagatcctaat
gggggcagtgaaggagaagaacatattcgaggaattatggctgaagccagaaaaattgca
gaactctgtgaagaccccaaagagcgagatgatattttgcggtccttaggagaaatctct
gctctgacggctaaattgtcagaccttcggaaacatgggaaaggggattctccagaagcc
cgtgcattagccaaacaaatagctacatcacttcagaatttgcagtctaaaaccaacagg
gctgttgcaaacagcaggcctgtcaaggcagctgttcatctggagggaaagattgagcaa
gctcagagatggatagacaatcctacagttgatgaccgtggagtaggtcaggctgcaatc
cgaggacttgtggctgaagggcgtcgtctggccaatgtcatgatgggaccttatcgtcag
gacctgcttgccaaatgtgaccgtgtggaccagcttgctgcccagttagctgatctggca
gcaagaggtgaaggagaatcgcctcaagccagggccattgctgctcagcttcaggactcg
ctaaaggatctgaaatcaagaatgcaggaagcgatgacccaggaagtatctgatgtgttc
agtgacaccacaacaccaattaaactgctggcagtagcagccactgctcctcctgatgca
cctaatagggatgaggtgttcgatgaaagggccgccaacttcgaaaaccatgctgccagg
cttggtgctacggcagaaaaggcagctgcagttggaacagccaacaaaagcactgtggaa
ggcatacaagctacggtgaagtcagccagagaactcacacctcaggtagtatctgctgcc
cgcatcctccttaaaaaccctggaaaccaagcagcttatgaacactttgagaccatgaag
aaccagtggattgacaatgtagaaaaaatgacaggcctggtggatgaagcaattgataca
aaatctctcttggatgcatctgaagaagccattaagaaagacctggataaatgcaaagta
gcaatggccaatatccaaccacagatgcttgtagccggggccaccagcattgctcggcga
gccaaccggattttgttagttgccaagaaggaagttgaaaactcggaggatcccaagttc
cgtgaagctgttaaagctgcttctgatgacctgagcaaaaccatctcgccaatggtgatg
gatgctaaagcggtggcaggcaacatttctgatcctggtttgcagaagaacttcctggat
tctggatataggattctaggagctgtagccaaagtccgagaagccttccagccccaggaa
ccagacttcccccctcctcctcctgaccttgagcaacttcatctcactgatgaacttgct
cctccaaagccacccctgccagaaggtgaagttccaccccccaggccacctccccctgaa
gagaaggatgaagagttcccagagcagaaggctggagaggtgcttaaccaacccatgatg
atggctgccaggcaattacatgatgaagctagaaagtggtccagcaagcctgatgtgact
gaggttaaggaagcccctgaggctgatgtagatgtagatcaggaggaggaggaggaggaa
gcagatgttgaattcactctcccctctgacattgaagatgattacgagcctgagctgctg
ttaatgcctaccaaccagcctgttaaccagcccattctggccgctgctcagtctctgcac
cgggaagccaccaagtggtctagtaagggtaatgatatcattgctgccgccaagcggatg
gcccttttgatggccgagatgtcccgcttggtgagaggtggcagtggaaacaagcgggcg
ctgatccaatgtgccaaggatattgcaaaagcatcagatgaagtgaccaggttggccaag
gaagtggcaaagcagtgcacagacaagcgcatcagaacaaacctcttgcaggtgtgtgaa
cgaatcccaaccatcagtacccagctcaaaatcctctccactgtcaaagcaaccatgttg
ggccgaacaaacatcagtgatgaggagtctgaacaggccactgagatgttggtccacaac
gcccagaacctgatgcagtcagtcaaggaaaccgttcgagaagcagaggctgcctctatt
aaaatcagaacagatgctggattcactctacgctgggtcaggaaaactccttggtatcag
tag
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