KEGG   Hemicordylus capensis (graceful crag lizard): 128349775
Entry
128349775         CDS       T08891                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04382  Cornified envelope formation
hcg04510  Focal adhesion
hcg04512  ECM-receptor interaction
hcg04518  Integrin signaling
hcg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128349775 (COL4A3)
   04518 Integrin signaling
    128349775 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128349775 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128349775 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128349775 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcg04147]
    128349775 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:hcg00536]
    128349775 (COL4A3)
Exosome [BR:hcg04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128349775 (COL4A3)
Glycosaminoglycan binding proteins [BR:hcg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128349775 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128349775
NCBI-ProteinID: XP_053162681
LinkDB
Position
3:311466549..311597693
AA seq 1672 aa
MNSQGRPLLLLACVLSALPARVPAAAAAANNCICNGKNLCFCDGIKGSKGEKGFPGFPGP
PGQMGFLGPEGYPGPQGPKGFPGQMGFPGPKGSRGMPGIPGYSGPPGLPGEAGNAGPPGR
PGIPGCNGTKGEQGFPGLPGQGGLPGFPGPEGMKGEKGCSASGYNRGYSAQGDPGLPGMP
GSQGMPGPQGLPGQMGPEGPPGFPGAQGRPGPAGPKGLMGVKIIGAKGIKGDNGLMGPPG
PPGTVIVTLTGADNTTEIKGDKGDMGSPGFSGPPGEPGLPGDSQNAKGDPGEQGPQGKPG
KDGIPGPLGLQGGKGEKGFQGLLGKVGPKGEKGEAGRQGNQGPTEYYDEVPGEKGNRGHT
GPPGPKGQPGVPGPQGSSGPIGRPGVSRPGPRGLQGSPGLKGSKGTRGQPGQNVIGPPGL
PGIPGRPGPAGSPGVSGPPGEMTFERGPLGTPGPPGCMGPPGLPGDSGTKGEEAGPCNQC
TYINGAPGLPGVPGPEGQQGIKGGDGTFGPKGSQGSPGRQGPPGIQGLPGLPGNQGLKGS
KGVPAYSSVEGSKGDKGENGIRGSSGEKGSDGLPGRPGLKGIKGCIGDQGFDSPKGDRGA
PGLLGSPGIPGPVGLPGPPGYGPQGMEGSKGSQGFPGLPGLLGITGAKGEPGKINAIPGP
PGLRGPDGRRGTQGERGSVGSRGERGVQGFPGPDGDPGLTGIGFPGCSGLKGDKGPQGSK
GLPGCPGKLGEPGLPGKPGRPGEKGEPGPLIPGQQGRLGSTGEEGTPGEKGERGFPGLPG
LQGQQGRDGADGPRGEPGPAGVLGEKGVPGKMGDCVIGLPGQQGPCGIIGPQGDRGALGD
RGDPGVPGLDIPGFPGQFGVPGLPGLQGDKGFPGIKGLTGRPGEPGISGPRGELGLMGPV
GIPGLPGVFGNSGVPGSRGSPGIPGPRGRKGTLGENGEPGDSGSPGPSEPRVIFGDKGEQ
GTKGFPGRMGLKGRKGEPGTQGCAGLNGLPGITGPPGSKGDKGLPGISGRQGLPGSPGER
GDMGTPGPKGEKGSSGLPGPSGIPGPRGLFGIPGDKGEPACPGFGPPGNPGPKGSPGLPG
ERGKKGEGGSSGPPGLLGEPGQPGDRGDTGLPGIPGQPGCVGVNGDKGSKGLPGQNGIRG
PPGSVGLPGVDGLAGERGNQGRDGIPGSPGEKGAQGSPGQPVPGPQGIPGPKGVKGDMGM
AGFPGPQGIKGLMGDQGPSGAPGLPGPPGLPGEPGIITSRKGNRGPPGPDGKPGVPGNIG
PAGLPNYSIKGSKGARGTDGLPGPPGTRGDVGLPGPAGIEGIPGYRGPRGDPGFQGFPGL
KGEKGNRGPPGPAGVPGPGGPKGQPGQSGPVVKAVSFPGNPGPAGLPGNPGNPGDPGPRG
PPGPPGRQGIKGQPGSHGIPGIPGPPGPKGDKGFPGKRGLPGLVGFPGIQGLPGYPGSCL
PELPKRGFIFSRHSQSIKIPSCPSGTTEMYSGYSLLFIQGNEQAHGQDLGAGGSCLQRFS
TMPFLLCNPSNVCSFASRNDYSYWLSTAEPMPADMAPISGRALEPYISRCIVCESPAMVI
AVHSQTTSVPSCPQGWQSLWKGFSFVMYTGAGSEASGQALASPGSCLENFHPVPFIECHG
RGTCNFFSNSYSFWLASLNPKRMFRKPLPQTMKAGELEKIISRCQVCMRIPN
NT seq 5019 nt   +upstreamnt  +downstreamnt
atgaactctcagggtcgcccgctgttgctgctcgcctgcgtgctgagcgctttgcccgcc
cgcgttcctgctgctgctgctgctgcaaacaactgtatctgcaatggcaaaaacctctgc
ttttgtgatggcataaaaggcagtaagggtgaaaagggctttcctggtttccctggcccc
cctggtcagatgggattccttggcccagaggggtatccagggccacaaggacctaagggt
tttcctgggcaaatgggcttccctggtcccaaaggttcaaggggtatgccaggaatccct
ggttattcaggtcccccaggacttccaggtgaagcaggaaatgctggtcctccaggacgt
ccaggtataccaggatgcaatgggacaaagggtgagcagggatttccagggctcccaggg
caaggaggactaccaggattcccaggtcctgaaggcatgaaaggagaaaaaggatgttct
gcaagtggatacaacaggggttatagtgcccaaggtgatcctggattgccaggaatgcct
ggatctcagggtatgccaggacctcaaggattaccagggcagatgggacctgaaggccct
cctggattcccaggagcacaaggaagaccaggacctgcggggcccaagggtctcatgggt
gttaaaataatcggagccaaaggaataaagggtgacaatggactaatggggccccccgga
ccaccaggaacagttattgtaacactgactggagctgataacacaacggaaataaaagga
gataaaggtgatatgggatctccaggattttctggaccaccgggagagccaggtttacct
ggtgattctcaaaatgcaaaaggagacccaggagagcaaggtcctcagggtaagcctgga
aaggatggtattcctggtccacttggcttacagggtggaaaaggtgaaaagggtttccaa
ggattgcttggaaaagtaggacctaagggcgagaaaggtgaagctggacgtcaaggaaat
cagggtccaacagagtattatgatgaggtgcctggtgaaaaaggaaatagaggccataca
ggacccccaggacctaaaggccagcctggtgtacctgggccacaaggttcctctggtccc
attggtaggccaggtgtttcaagacctggtccaagaggcctgcaaggctcccctggcctc
aaaggaagtaaaggaaccagaggacaacctggccagaatgttattggaccaccaggactt
cctggaattccaggaagaccaggcccagcaggatcaccaggtgtttcaggaccaccaggt
gaaatgacttttgaaagaggcccactaggaacccctgggccaccgggatgcatgggccct
ccaggccttccaggagatagtggaacaaaaggtgaagaagcaggcccatgcaaccagtgt
acttatattaatggagcacctggccttcctggtgttcctgggccagagggccaacaagga
ataaaaggtggtgatggaacatttggtcctaaaggatcccaaggatcccctgggcggcag
gggcctcctggaattcaaggacttccaggtcttccaggaaaccaaggccttaaaggatca
aaaggtgtaccagcatattcgagtgtggaaggttcaaaaggagacaaaggagaaaatggt
atcagaggaagctcaggagaaaaaggttcagatggattgcctggaagacctggcctgaaa
ggcataaaagggtgtataggagaccagggatttgatagtccaaaaggagacagaggtgca
ccaggattgctgggcagtccaggcattcctggaccagtagggctacctgggccaccagga
tatggaccacaaggaatggaaggttctaaaggctctcaaggatttcctggattgcctggg
ttgcttggaataactggtgctaaaggtgaacctggtaaaataaatgcaattccaggacca
cctggacttcgagggccagatggtagacgggggacacaaggagaaagaggaagtgttgga
tccagaggggaacgtggtgttcaaggctttccagggccagatggtgatccaggcttaacg
gggattggatttcctggatgttctggtttgaaaggagacaaaggacctcaaggctctaaa
ggactaccaggttgtccaggaaaattaggagaaccaggcttacctggaaaacctggaaga
ccaggagaaaagggagaaccaggtccacttattcctggacaacagggtagactaggttca
acaggagaagaaggcactccaggtgagaaaggtgaaagaggattcccaggtctcccagga
cttcaaggtcaacagggtcgtgatggtgctgatgggccaagaggagaacctggccccgct
ggagttctaggagaaaagggtgttccaggaaaaatgggcgattgtgttattggtttacca
gggcagcaaggaccatgtggaataataggcccacaaggggacagaggagcattaggagac
agaggagatccaggtgttccaggactagatatcccagggttcccaggacaatttggggta
cctggattacctggccttcaaggagataaaggatttcctggtatcaaaggactaactggc
aggccaggagaaccaggtatttcaggtccaagaggagaactaggcttgatgggccctgta
ggtattcctggattacctggtgtttttggaaattcaggtgttcctgggagcaggggttct
cctggcattccaggaccaagaggaagaaaaggaacattaggggagaacggtgaaccaggt
gatagtggttccccaggaccatcagagcccagagtgatttttggagataaaggagaacaa
ggaaccaaaggatttccaggaagaatgggactcaagggaagaaaaggagagccaggtaca
caaggttgtgcgggtcttaatggcctaccaggaataacaggaccaccaggttccaaagga
gataaaggactgccaggcatttctgggcgacaaggattgccaggatctcctggagaaaga
ggggacatggggacaccaggtcctaaaggtgaaaagggttcttcaggtttgcctggccca
tcaggtatacctggaccacgtggcctttttggtattccaggggataaaggagaaccagct
tgtcctggatttgggcctccaggaaacccaggacccaagggcagtccaggtcttccaggg
gaaagaggaaagaaaggtgaaggtggatcatcaggccctccaggacttctaggagaacct
gggcaacccggagacagaggggatactggtttaccaggaattccaggacagccaggatgt
gtaggcgttaatggtgataaaggaagcaaaggattaccaggacaaaatggcattaggggc
cctccaggttcagttgggttacctggagttgatggactagcaggtgaaaggggtaatcaa
ggacgtgatggtattcctggctccccaggagagaagggagcacaaggttctcccgggcag
ccagttcctggtcctcaaggtatccctggtcctaaaggtgtcaaaggagatatgggaatg
gctggttttccaggaccgcagggtattaaaggtcttatgggagaccaaggaccaagtgga
gctcctggtttacctggaccaccaggacttccaggagaaccaggcataattactagccga
aaaggaaatagaggcccccctggtccagatggaaagccaggtgttcctggtaatataggg
cctgctggactacctaactacagtattaaaggaagtaaaggtgctcggggaacagatggc
ttaccaggtccaccaggaactagaggggatgttggtctgcctggtccagcaggaattgaa
ggtatcccgggctatcgaggtccaagaggtgaccctggttttcagggatttccaggacta
aaaggagaaaaaggcaaccggggaccacctgggccagcaggagtaccagggcctggaggg
ccaaaggggcaacctggccagtctggaccagttgtgaaagctgtctctttcccaggaaac
ccaggacctgctggacttccaggcaacccaggaaatccaggggatccaggtccccgagga
ccacctgggccaccagggcgccaaggtataaaaggccagccaggcagtcatgggattcca
ggtatacctggaccacctggtccaaaaggagataaaggatttccaggaaaaagaggtttg
cctggactggttggttttcctggtatacagggactgcctggataccctggaagttgtttg
cctgagctaccaaaaagaggcttcattttttctcgacacagccagtcaataaagattcct
tcatgtccatctgggacaactgaaatgtatagtggctattctcttctttttatacaaggg
aatgagcaagcacatggacaagatcttggtgcaggtggtagctgtctccagagatttagc
accatgccctttttattatgtaatcccagtaatgtctgtagttttgcttctcgcaatgac
tattcatactggctgtcaactgcagaaccaatgccagcagacatggcacccatttccggg
agagctttggaaccctatattagcagatgcattgtctgcgaaagccctgcaatggtaata
gcagtccacagtcaaaccacttcagttccatcctgtcctcagggctggcagtctctttgg
aaaggattttcttttgttatgtatacaggagcaggctcagaagcttccggacaagcactg
gcatctccagggtcatgtttagaaaattttcaccctgttccatttatcgaatgtcatggc
cgagggacatgcaatttcttctcaaactcctacagcttctggctggcttcactaaatcca
aaaaggatgttcaggaagccattgccacaaactatgaaagctggagaactggaaaaaatt
atcagtcgctgtcaagtctgcatgaggatacccaactga

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