Hemicordylus capensis (graceful crag lizard): 128349974
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Entry
128349974 CDS
T08891
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128349974 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128349974 (TGFBRAP1)
Membrane trafficking [BR:
hcg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128349974 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
WD40_like
Beta-prop_WDR19_2nd
Cas_Cas02710
Motif
Other DBs
NCBI-GeneID:
128349974
NCBI-ProteinID:
XP_053163353
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Position
3:complement(136786003..136822600)
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AA seq
886 aa
AA seq
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MQAACSRLLSLGYVGGHLESAMSVKAFKLVPAVEREMLMGDKVRINIECIECCGKNLYIG
TNDGSIYHFLLEEKNSPAEKTHFYVTKQLHKYLSVRKAVGELKAASALNRLLVLCDSTIT
LVNMMNLEPIPTGARIKGAVTFALNENPVNGDPFCVEVCIVSVKRRTIQLFLVYEDRVQI
VKELSTQEQPCAVAVDGHYLCLALTTQYIILNYNTGVSQDLFPYSSEERRPIVKRIGREE
FLLAAPGGLGMFATVDGISQRAPVHWSENVIGAALCFPYVVALDEEFITVHSMLDQQQKQ
TLPFKDGHILQDFEGKVIVATSKGVYILVPLPLERQIQDLLASHRVEEALVLAKGARRNI
PKEKFQLMYKRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFMRT
HPPLHEYADLNQLTQGDQEKVAKCKRFLMSYLSEVRSMDVANGYKEDIDTALLKLYAEAN
HESLLDLLVSENFCLLTDSAAWLEKHKKFFALGLLYHSNGQDAAAVQLWVKIVNGDIQDS
TRTDLYEYIVDFLTSCMDHELVWKYAEWILKQNEEVGVYIFTKRPLEEEQQKNSFNPDDV
ISCLNKYPKSLVKYLEFLVLERRIKKEKYHTHLAVLYLDEVLHLKSQEGIKRGEELSKTQ
AKLRSLLQKSDLYRTHFILDKIIDSNLHMECAILYGKLEEHDKALHILVHEIKDFNAAED
YCVWNSENKDPPYRRKLFHMLLSCYLNSSSSEHKLLMAAVDLLNNHTAEFDAANVLQLIP
DTWSVQLLSSFLTGAVRESIHAQRMTQIALGLAKAENLTYKHEKVKLKGNQTVLSDRKAC
QVCQSPFCEPVFVRYPNGGVVHTHCAANRLVDSNTNHHLSSPSGRT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgcttgctcccggctgctctctctgggttatgtcggaggccatctggaaagc
gcaatgagtgtcaaggccttcaagcttgtccctgcggttgagcgggaaatgctgatgggt
gacaaagttcggatcaatattgaatgcattgagtgctgtggaaagaacctttatattgga
accaatgatggttctatctatcacttccttctagaagaaaagaattcaccagctgaaaaa
acacatttttatgttaccaagcagttacataaatacttaagtgttcggaaggctgtgggt
gagttgaaagcagcgtcagcactcaacagacttctggtgctttgtgacagcaccataaca
ttagtgaacatgatgaatctggaacccatccccacgggggctagaatcaaaggagctgtg
acatttgcattgaatgagaaccctgtgaatggtgatccattttgcgttgaagtttgtatt
gtttcagtcaaacggaggaccatccagctcttcttggtatatgaggacagagtccagatt
gtgaaggagctttccactcaggagcagccctgtgctgtggccgtggatggccattactta
tgccttgccctcaccacccagtacattatcctgaattacaatactggagtctcccaggat
ctctttccttattctagtgaagagagacgaccaattgtgaaaagaataggcagagaagaa
ttcctgttggctgcacctgggggattaggaatgtttgcaactgtggatggcatttcccag
cgtgctcctgttcactggtcagaaaatgtgattggggctgccctgtgcttcccttatgta
gttgctctggatgaggagttcattaccgtgcatagtatgctggaccagcagcaaaaacag
actctgccctttaaggatggtcacatcctacaagactttgaaggcaaagtaattgtagct
accagcaaaggggtatacatcttggtgccactacctctggaaagacagattcaggatctt
ttggccagccatagagttgaagaagctctagtgttggcaaagggagctcgaagaaatatt
ccaaaagagaaatttcagttgatgtacaaacgaatcctgcagcaagcaggatttatacaa
tttgcacagcttcagttcctagaagcaaaagaactcttcagaagcggccagctggatgtc
cgggagctgatctctctctaccccttcctgttgcctacttcctcttccttcatgcggact
cacccacctctccatgaatacgctgacttgaatcaactgacgcaaggggaccaggagaag
gtggccaagtgcaaacggtttctcatgagttacttgagcgaagtgcgcagtatggacgtt
gcaaatggctacaaggaagacattgatacagctttattgaagctctatgcagaagcaaat
catgaaagccttctagatctgctggtctctgagaatttctgtcttctcacagatagtgct
gcatggctggaaaagcacaaaaagttttttgcacttggtctcctgtatcactcaaatggt
caagatgctgcagcagtacagttatgggtaaaaattgttaatggagacattcaggactct
acacgcacagacctttatgagtatatcgtagacttccttacctcttgcatggatcatgaa
ctggtgtggaagtatgcagaatggatcttgaagcaaaatgaagaggttggagtatacatt
ttcactaaaagacccttagaagaagagcaacagaagaacagctttaatccggatgatgtc
atcagctgccttaacaaatatcccaaatcattagtaaaatatttagagttcttggttctg
gagagaagaataaagaaggaaaagtaccacacccatctagcagtattgtatctggatgaa
gtgctacacttgaaatcacaggagggcataaagaggggtgaggaactgagcaaaacacaa
gctaagctacgcagtcttctgcagaaatctgacctttatagaactcacttcatactagat
aaaatcattgactcaaatcttcatatggagtgtgcaatattgtatggaaaattggaagag
catgacaaagcgttacatatcttggtccatgaaataaaggatttcaatgctgctgaggac
tactgtgtatggaattcagaaaacaaagacccaccttacaggcggaagcttttccatatg
ctgctttcctgttatctgaactccagctcatctgaacacaaactgctcatggctgctgta
gatctccttaataaccacacagctgagtttgatgcagcgaatgttctgcagcttatacct
gacacttggtcagtgcagcttctgtcttcatttctgactggtgcagtgagggaaagtatc
catgcgcaaagaatgactcagattgccctgggattagcaaaagctgagaacctcacttat
aagcatgagaaggtgaagctaaaaggaaatcaaactgtgctctcagacagaaaagcctgc
caggtgtgtcaaagccccttctgtgagcctgtctttgtcaggtatccaaatggtggtgtg
gtccacacgcattgtgctgcaaacagactggtggattccaacacaaaccaccatttatct
agccccagtggacggacatga
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