Hemicordylus capensis (graceful crag lizard): 128350171
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Entry
128350171 CDS
T08891
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128350171 (PRPF39)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128350171 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
Mad3_BUB1_I
TPR_19
TPR_15
Motif
Other DBs
NCBI-GeneID:
128350171
NCBI-ProteinID:
XP_053163934
LinkDB
All DBs
Position
1:complement(4588602..4644110)
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AA seq
672 aa
AA seq
DB search
MQSSDHKDDHNSLKSEIMGKATEAKSEQVADFGTEIMSVTEMEQSPENSPGTNTQEENTQ
DSEMPDTETLKTSDSDPSFPPEFDKFWNVVETNPQDFTGWVYLLQYVEQENQLPAARKAF
DSFFSHYPYCYGYWKKYADLEKRHSNMKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
ASDPETVGTIRGTYEHAVLAAGTDFRSDKLWEMYINWENEEGNLKAVTAIFDRILGIPTQ
LYSHHFQRFKEHVQNNLPRDLLTTEQFIQLRRELASSANSHNGEDAPPGDDLPSGIEDIT
DPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKTQLKNWK
EYLDFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVYSRACTIHL
SKKPMVHLLWAAFEEQQGNINEARRILKTFEENVSGLAMIRLRRVSLERRHGNMEEAEHL
LQEAVKNAKSSYEASFFAVKLARHLFKIQKNLLKARKVLLDAIDRDRDNPKLYLNLLEIE
YNGDLKQNEENIIACFDKAISGTLAVKMRIIFSQRKVEFLEDFGLDVNKLLDAYEEHQAL
LKEQESLKRKAENGCEEPDEKRAHGDEAALASGQMMDGDMQANQAAYNYNAWYQYNYPNA
WNYGQYYQSPST
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatcataaggatgatcacaacagcttgaaaagtgagatcatgggcaaa
gccactgaagccaagagcgagcaggtggcagatttcggcacagagatcatgagcgtcaca
gagatggagcagtctcctgaaaactcacctggaaccaatacccaggaagagaacacccag
gacagtgaaatgccagacactgaaactctaaagacttctgattccgatccttcattccct
ccagagtttgacaagttctggaatgtagttgagacaaacccacaggatttcacaggttgg
gtgtatctcttgcagtatgtagaacaagagaaccagttaccagccgccaggaaagccttt
gacagttttttctcacattacccgtattgctatggttattggaaaaagtacgcagacctt
gagaagcgccacagcaacatgaaacagtcggatgaggtatatcggagaggactccaagca
atacctcttagtgttgatctctggatccattacataaacttccttaaagagaccctggat
gccagtgatcctgaaactgttgggaccattagggggacctacgagcatgcagtcttagct
gcagggacagatttccgctcagacaaactctgggaaatgtatataaactgggaaaacgaa
gaaggtaatctgaaagcagttacagccatatttgatcgcattcttgggattccaacccag
ctgtacagtcatcacttccaaaggttcaaagagcatgtccagaataacctgccccgagac
cttcttactactgaacagtttattcagctgcggagagaactggcttcttctgccaatagc
cataatggggaggatgcacctcctggagatgacctcccttctggaattgaagatataacc
gacccagctaagctaatcaccgaaatagaaaacatgagacacagaataattgagattcat
caagagatgttcaatcacaatgagcatgaagtcagcaagaggtggacttttgaagaaggg
atcaaacgaccttattttcatgttaaacctctggagaaaacccagctgaagaactggaag
gagtacttggactttgagattgagaatggtactcacgagcgagtggtggtcctctttgag
cgctgtgtgatctcctgtgccctctatgaggagttctggatcaagtatgccaagtacatg
gagaaccacagcattgaaggggtgaggcatgtctacagccgggcctgcacgatacacctc
tcgaagaagccaatggtgcacttgctctgggctgcttttgaagaacagcaagggaatatc
aatgaagcccgaagaattctgaagacctttgaagagaacgtttctggtctggccatgatc
cgcttgcggagagtgagtttagaacgacggcatgggaacatggaggaggccgagcacttg
ctccaggaagctgtgaagaatgccaagtccagctatgaagcctcattctttgctgtcaag
cttgctcggcatcttttcaaaatccagaagaacctcctgaaagccaggaaagtgctcttg
gacgccattgacagagacagggataatccgaaactgtatctcaacctgctggaaatagaa
tataatggagacctgaaacagaacgaagagaacatcattgcctgttttgacaaagctatc
agtggtacattggcagtaaaaatgagaatcatattttctcagcgaaaggtggaattcctt
gaagattttggcctggatgtgaacaagcttttagatgcctatgaagagcatcaagccctt
ttgaaggaacaagagtcactaaaaaggaaagcagaaaatggctgtgaggagccggatgag
aagcgggcccacggtgatgaggcagctcttgcgtctggccaaatgatggatggagacatg
caagcaaatcaggctgcctacaattataatgcctggtaccaatacaactacccaaatgca
tggaattatggacaatattatcagtccccttcaacttga
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