Hemicordylus capensis (graceful crag lizard): 128350240
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Entry
128350240 CDS
T08891
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128350240 (RNF13)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128350240 (RNF13)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128350240 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
FeoB_associated
DUF7027
zf-RING_16
Neur_chan_memb
zf_RING_Vps8_fungal
SID-1_RNA_chan
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
128350240
NCBI-ProteinID:
XP_053164176
LinkDB
All DBs
Position
3:319769432..319873127
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AA seq
385 aa
AA seq
DB search
MLLSIGMLMLSATQIYTILTVQLFAFLNLLPVEADILAFNFENATQTFDDLPARFGYRLP
AEGLKGYLISSKPENACEPITPPPLKDNSSHEFIVLIRRHDCNFDTKVLNAQIAGYKAAI
VHNVDSDDLISMGSNDIDILKKIDIPSVFIGESSANALKEEFTFDKRGHIVLIPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ
EENEVSENTPLLRPLASVSTQSFGAVSESYSHPNMTESSDYEDNDDEEENEDIDSSDVEN
GVTEESVVVQLQPNEEQDYRVANTV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtcaataggaatgttaatgttgtctgccactcagatttacaccattctcacg
gttcagctgtttgctttcttaaacctattgcctgtggaagcagacattttagcgtttaat
tttgaaaatgcaacgcagacatttgatgacctaccagcgaggttcggctaccgactgcca
gcagagggcttgaagggttatctgatcagttcaaaacccgagaatgcctgtgagcctata
acccctccacctctgaaggacaattcatcccatgaattcattgtattgatcagaagacat
gattgcaactttgataccaaggttttgaatgcacaaatagctggctataaggcagccatc
gttcacaatgttgattccgatgacctcattagcatgggatccaacgacattgacatttta
aagaagattgacattccttctgtctttattggtgaatcatcagcgaatgccctcaaagaa
gaattcacctttgacaagagaggccacattgtgttaatcccagagttcagccttcctttg
gagtactatttaatcccattcctaattattgtggggatctgcctcatccttattgttatt
tttatgatcacaaaatttgtccaggacagacacagagcaagaagaaatcggcttcaaaaa
gatcagcttaagaagcttcctgtacataagttcaagaaaggagacgagtatgatgtttgt
gccatttgtctggatgaatatgaggatggagacaagctcagaatccttccatgctctcat
gcatatcactgcaagtgtgtggatccttggctgactaaaaccaagaaaacatgccctgtg
tgtaaacagaaagtggtcccttcccagggggattcagactccgacaccgacagtagtcag
gaagagaacgaagtctcggagaacaccccgttgcttaggccacttgcttcagttagcact
cagtcctttggggcggtgtcagagtcttactcccatccaaacatgacagagtcttcagac
tacgaggacaacgatgatgaagaggagaatgaagatatcgacagtagtgatgtggagaac
ggagtgactgaagagagtgtagtggtccaactacagcccaatgaggaacaggattataga
gttgcaaatactgtctga
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integrated database retrieval system
