Hemicordylus capensis (graceful crag lizard): 128350385
Help
Entry
128350385 CDS
T08891
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128350385 (SHOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_At5g56370
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
128350385
NCBI-ProteinID:
XP_053164603
LinkDB
All DBs
Position
3:complement(276401643..276514268)
Genome browser
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVSSAKEREKEAKASGGFGKESKERELKTKGKEAKDGKKDSSGA
QPGVAFSVDNTIKRPNPAPGARKKSSNAEVIKELNKCREENSVRLDLAKRSIHLLPSSVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMVDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSMLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIP
RSLAQCGKLDELNLENNNISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYAL
NMEHNRINKIPFGIFSRARVLSKLNMKDNQLTSLPLDFGTWISMVELNLATNQLNKIPED
VSGLVSLEVLVLSNNLLRNLPHGIGNLRKLRELDLEENKLESLPQEIAYLRELQRLILTN
NQLSTLPRGIGHLTNLTHLGLGENFLTQLPEEIGPLENLEELYLNDNPHLNSLPFELALC
SKLAIMSIENCPLNTLPAQIVAGGPSFIIQFLKMQGPYRAMI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatcttggaaaagaaaaagattgtaaagagaaggaccccaaagtatcttca
gcaaaagagagggagaaagaggccaaggcttctggtggatttgggaaagaaagcaaagag
agggagctcaagaccaaagggaaagaagccaaagatgggaagaaggactccagcggcgca
cagccaggtgtggcgttttcagtggacaatacaataaaacgacctaatccagctccaggt
gctcgcaaaaaatccagcaatgccgaagtgatcaaagaactaaacaaatgtcgggaagaa
aactcagtgcgcttggacttggccaaaaggtcaatacacctgctcccatcatctgtcaaa
gagctaacacagttgactgaactttatttatatagtaacaaactgcagtcattgccagct
gaggtgggctgccttgttaatctggtgacactggccctgagtgagaactcgcttaccagc
ctgcctgactctcttgataacttgaagcaacttcgcatggttgatctacggcataacaaa
cttagagaaattcctccagtggtgtataggctaacctcccttaccacactttatctacgc
tttaatcgtatcacagctgtggaaaaggatatcaaaaacttgtcaatgctcaccatgctc
agcatacgggagaacaaaatcaaacaactgcctgcagaaattggtgaattgtgtaacctc
ataacgctggatgtagcacacaatcagcttgagcatcttccaaaggagattggaaattgc
acgcagatcaccaaacttgacctacagcacaatgaactgttggacctcccagacagtata
ggaaatctgtccagtctgaaaagccttggtctgaggtataaccggctctcagcaataccc
aggtcgctagcacagtgcggtaaacttgatgagctgaatttggagaacaacaatatttct
actttaccagagggtctcttatccagtcttgtgaacctgactagcctaactctggcaagg
aactgtttccagtcatatccagtgggtggcccttcacaattctctaccatctatgctctc
aacatggagcacaaccgcatcaataaaattccctttgggattttctctagagcaagagtg
ttgagtaagctgaacatgaaggacaatcaactgacttcccttcccctggattttgggaca
tggataagtatggtagaactcaatttagctacaaatcaactcaacaaaatccctgaagat
gtttctggactagtttccctagaggttcttgttttatcaaacaaccttctaagaaacctg
cctcatggcattggaaatctgcggaaactaagagaactggatctagaggaaaacaagttg
gaatccttgccacaggaaattgcatacctgagggagctgcagagactaatcctaacaaat
aatcagttgagcactcttcctagaggaataggccacctcaccaatctgacacatctggga
cttggagagaattttcttacacagcttcctgaggaaattggtccactggagaatctggaa
gaactatatctgaatgacaacccccacctgaacagccttccttttgaactggcactctgc
agtaaacttgctataatgagcattgagaactgcccactcaatacccttccagctcaaatc
gttgcagggggaccttcctttatcatccagttcctcaaaatgcagggaccatatcgtgcc
atgatctga
DBGET
integrated database retrieval system
