Hemicordylus capensis (graceful crag lizard): 128350465
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Entry
128350465 CDS
T08891
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128350465 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128350465 (NUP98)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128350465 (NUP98)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128350465 (NUP98)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128350465 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128350465
NCBI-ProteinID:
XP_053164844
LinkDB
All DBs
Position
3:2173290..2235779
Genome browser
AA seq
1801 aa
AA seq
DB search
MFNKSFGTPFGGTTGGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQAKPG
TGGLFGASTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQNKPAGF
GNFGTSTSSGGLFGTTNTTSNPFGGTSGSLFGTASFTTVPTGTTIKFNPPTGTDTMVKSG
VSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATPGLFGSSTATSSA
ATGLFGSSTTNTGFSYGQNKTGFGTSTTGFGTGTGGLFGQAQPTTSLFNKPFGQATTAQN
TGFSFGNTNTLGQPNTNTMGLFGATQPSQTGGLFGTAANTNTATAFGTGTGLFGQANTGF
GVGGSSLFSNKPAGFGTTTTSAPSFGTNTTGLFGFGGNTTGNSLFGNKPAAGALGTGLGT
GFGTALNAGQTSLFGSTQPKLGGALGTGAFGAPGFNTSTATLGFGAPQPAVALTDPTASA
AQQAILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPR
PATRVRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKRSIKKLVLKNLNSSNLFSPLS
GEADDLASPSEYPENGERFNFLSRSVEENHRQDGEQEEEDTSHHEVTGFFSNPIAKQTPE
KAMHKHHNHVDNTIMALNVRPPLRNGLEGSSEEASFHEESLQDDHEEETESIHHIHPAGI
VSTRVGYYTIPSMEELARMTTDRGECLVTDFTIGRKGYGSIFFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRGLIKSPERLAEMNYEGRLEA
VSRKQGAQFKEYRPETGSWIFKVAHFSKYGLQDSDEEEEEHSSKVDAKKLKTAQAPPLGQ
SVSQQVALSGKPALPSKSPDVEQLGKVAEFDSDMADITQDIAQDSAVEESLAEEQEPVPA
STHIASSLDINPHTLQIMKASLLVDEEDLDFILDHRFGKQLPLVDTSQEICSPRLPIAAS
TQERKSRPSVGGLLRPRVSSGSFLLPAASLQDLRSPRTSLQGGAPSAPSWSARSPLASVF
TVPSSAPDVPLKTVGIRRHPGLVPLEKSVTYGKGRLLMDMALFMGRSTRVGWGANWILVH
SGEQLSSGLSDPEDLCNTSMEYGFLPAPVAPKQLSESPFKVHVEKLSLEGKASGNQDSYL
IPLEIKLKHSTVHMDEPCPLITPNPGVAAIHEYAGWATEVSGDREEERAAVKDWALVWTL
CEALWGHLKELEARLDEPSEYTLALERRKAFSRWLSQTAAERIEEEVSLSQQDNPTEAVF
SYLTGKRISEACQLAQQSGDHRLALLLSQLVGSQEVRELLAMQLADWHHLQADGFIQEER
LRIFALLAGKPVWHLSERRSVNVCSQLDWKRSVGIHLWYLLPSTAPLSKALSMYEAAFQN
SSECDKYACSPLPPYLEGSGYVVEDGDSQHPLRDVCFHLLKLYSDRCYELQELLDPRSIT
ADPLDYRLSWHLWEVLRALNYTHLSERGQGVLNASYASQLESEGLWEWAVFVLLHVPSAH
TREKAVRELLNRHCTLVETPESWAKEAFLTERLCVPPEWIHEAKALRARMEGDKHKEALY
LFKAGHWSPCHRLVVQHLASDAIINENYTYLKGYLENLSAPEHSALIQDWDTAGLVFLDY
IRVVEMLDKIQQLDCSGYELEELHTKVTSLCTRVEQVQCRNAKDRLAQSEMAKRIANLLR
VVLSLQHPPDSASNSTPDVQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVAT
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggcacgccttttggaggcaccacaggcggctttgggacaact
tcaacttttgggcagaatgctggctttgggactacaagtggaggagcatttggaacgtct
gcatttggatcaaataacaacacagggggcctctttgggagtacgcaggccaagccaggt
acaggaggcttgtttggtgcaagcacctttagccagccagccacgtcctccacgagcacc
ggctttgggtttggaacatcaacaggaacttctagtggcttgtttggaacagcgagcacc
ggcggaggtctcttctcatcccagaacaatgcttttgcacagaataaacctgcagggttt
ggcaactttgggacaagtactagcagcggtggcctgtttgggaccaccaacaccacctcc
aacccatttggggggacttctggatccctttttggaacggctagctttaccaccgttccg
actggcactaccattaaattcaacccaccaactggcacagacactatggttaaatctggt
gtcagtacaaacatcagcacgaaacatcagtgtattactgctatgaaagaatatgaaagt
aaatcgctggaggaacttcgtttggaagactatcaagcaaacaggaaaggtccctccaac
cctgtaggagcaggagccactcccgggctctttggatcgtccacggctacgtccagtgca
gccacgggcctctttggatcgtccaccaccaacactggtttttcatatggacagaataaa
accggctttggaactagtacaacaggttttggaacaggaactgggggcctctttggccag
gctcagccaaccaccagcctcttcaacaagccgtttggccaggccaccactgcgcagaac
acgggcttttcgtttgggaataccaacacccttgggcagcccaacacaaacaccatgggt
ttatttggagcaacacagccctcacagactggaggcctttttgggacagctgccaatacg
aacactgcgacagcatttggaactgggacgggcctctttggacaagccaacacaggattt
ggtgttgggggctcgtctctgtttagcaacaagcctgctggatttggaaccacaaccacc
agtgcaccttcatttgggacaaatacaactggccttttcggctttggtggaaacactact
gggaatagcctgtttggaaacaagcctgcagctggggctctgggaactggacttggtaca
ggatttggaacagcccttaatgcagggcagacgtccttatttggaagcacccagcctaaa
cttgggggtgcactggggacaggagcatttggtgcccctggatttaatacctcaacagcc
accctaggctttggagctccccagcctgctgtggctctgacggaccccactgcttcggca
gcccagcaagccattcttcagcagcacctcaatagcctgacttattcgcccttcggggat
tcccctctcttcagaaaccccatgtctgacccaaagaagaaagaggagagactgaagccc
accaatccagcagctcagaaggcattgaccacgcccactcactacaagctgactcctcgc
cctgcaactagagtacggcccaaggctttgcagaccacaggatcctcaaaatcccacctc
tttgacggcctggatgacgacgagccagccctgtccaacggggcgttcatgcccaagagg
agcattaagaagctagttctgaagaacctcaacagcagcaatctgttctcacctctcagt
ggcgaagctgatgaccttgcttctccatcagagtatccagagaatggagaacgcttcaac
ttcctctccaggtcggttgaggagaaccacagacaggacggggagcaggaggaagaagac
accagtcatcacgaagtgaccggcttctttagcaaccccattgccaagcagaccccagag
aaagccatgcacaagcaccacaaccatgtcgacaacactatcatggccttgaacgtgcgc
cctcccctgcgaaatgggctggaaggcagcagtgaggaggcctccttccacgaggaatcc
ctgcaggatgaccatgaggaggagacagagagcattcatcacatccatccagcaggaatt
gtttcgacacgagtgggctattacaccatcccatccatggaggagttggccagaatgacg
actgacagaggggagtgcttggtgacagacttcaccatcggccgtaaaggctacggctcc
atcttctttgaaggcgaagtaaacctgactaacttgaatctggatgagattgtgcacatc
cgcaggaaagaagtgatcgtctacccagatgatgaactgaagccacccattggggaaggt
ttgaacaggagagctgaagttactttggatggagtttggcccactgataaaacctcccgt
ggtttgataaaaagcccagaacggctggcagaaatgaactatgaaggaaggctggaggcg
gtgtctcggaagcaaggtgcccaattcaaggagtaccgccctgaaacgggttcgtggata
ttcaaggtggctcatttctcaaaatatggcttgcaagattctgacgaggaagaggaggag
cattcatcaaaagtagatgcaaagaagttaaaaactgctcaggcacccccgctgggccag
tcagtgtcccaacaagtagctctgagtgggaaaccagcactgccctccaagagcccagat
gttgaacagctggggaaggtggcggagtttgacagtgacatggcagacatcacccaggac
atcgctcaggattctgcagtggaagagagccttgcagaagagcaggagcctgtgccagcg
tccactcacattgcatcctctctggacatcaaccctcacacactgcagataatgaaggct
tcattgcttgtggatgaagaagatctggacttcatcctagatcaccgatttggcaagcag
ttgccactggtggatacttcccaagaaatttgctctccaagactgccaattgctgcctca
acacaggagaggaaaagccgtccctcagttggtgggctgctgcggccgagagtctctagt
gggtctttcctcctccctgctgcttctctccaggacctccgcagcccaaggacttccttg
caaggtggtgctccttctgcgccttcatggtctgcacgttccccgctggcttctgttttc
acagtgcccagttcagcgcctgacgttccactgaagacagtgggtatccgcaggcatcct
gggctggtgcctttggaaaaatcagtcacctatgggaaaggaaggcttctgatggatatg
gctctcttcatggggcgctccacccgtgttggctggggagccaactggattcttgtccac
agcggagagcaactgagcagtgggttgagtgatccagaagatctctgcaatacgtccatg
gagtatggattcttgccagcacccgttgctcctaaacagctctcagagtctcccttcaag
gttcatgtagagaagctcagcctggaaggaaaggccagtgggaatcaggactcctacctc
attccactggagatcaagttgaagcacagcactgtccacatggacgaaccctgccctctc
atcacccccaaccctggggttgctgccatccacgaatatgccggctgggccacagaggtc
tcgggagaccgagaagaagagagagctgcggtgaaggactgggctctggtgtggactttg
tgtgaggcactctggggccacttgaaagagctggaggcccgcctggatgagcccagcgag
tacacccttgctttggagcgccggaaggctttttcccgctggctgtcgcaaacggcggct
gagcggattgaggaggaggtctctcttagccagcaggacaatcccacagaggctgtcttc
agctacctcactgggaaacgcatcagtgaagcttgtcagctggctcagcagtctggggat
cataggctggcgttgctcctctcccagctggtagggagccaggaggtccgtgaacttctt
gccatgcagctagcagactggcatcacctccaggcagatggcttcatccaggaggagaga
cttcgcatctttgccctgctagctggcaagccggtgtggcacttgtcagagaggagaagt
gtcaacgtctgttcccagctggattggaagcgctctgtgggcatccatctctggtacctg
cttccctccacagcccccctttccaaggctctcagcatgtacgaagctgcattccagaac
tcctcggaatgcgataagtatgcctgttctccgctgcctccatatcttgaaggctcaggc
tatgtggttgaagatggcgattcacagcaccccctgcgagatgtctgctttcacctctta
aaattgtacagtgacaggtgttacgagctccaggaactgcttgaccccaggagcataacg
gccgaccccttggactaccgcctcagctggcacctgtgggaagtgctgcgggccttgaac
tacacccacctgtcggagcggggccagggcgtgctgaatgccagctatgcctcccagctg
gagagcgaggggctgtgggagtgggcggtcttcgtcctgctgcacgtgcccagtgcccac
acgcgtgagaaggcagtacgcgaattgttgaaccgccactgcacgctggtggagacgccg
gagtcctgggccaaagaggccttcctcacagagagactgtgtgtgccaccagagtggatc
catgaagccaaggcgctgagggccaggatggagggagacaagcacaaggaggccctctac
ctgttcaaggcagggcactggagtccctgccacagacttgtcgtccagcacctggcttca
gatgccattattaacgaaaactacacctacttgaaggggtatttggaaaacctgtctgct
ccagagcacagcgcactcattcaggactgggacactgctgggctggtgttcttggactac
atccgggtggtggagatgcttgacaagatccagcagttggattgctctgggtacgagctg
gaggagctgcataccaaagtgacgtcgctctgcaccagggtggagcaagtccagtgccgc
aacgccaaggaccgcttggcccagtcggaaatggccaagcgcattgcaaacctcttgcgt
gtggtgctgagcctgcagcaccctccggactctgcctccaactccaccccggatgtgcag
agggtgcccctgcgcctgctcgccccccacattggccggctgcccatgccggaggactac
gcactcgaggagctccgcagcctcactcagtcttacctgcgggaactgacagtggcgacc
cagtga
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