Hemicordylus capensis (graceful crag lizard): 128350749
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Entry
128350749 CDS
T08891
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128350749 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128350749 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128350749 (LDB3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128350749
NCBI-ProteinID:
XP_053165363
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All DBs
Position
3:complement(220055371..220304426)
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AA seq
798 aa
AA seq
DB search
MSYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDMVVAIDGVNTDGM
THLEAQNKIKSASYNLALTLQKSKRPAPVPTATPRIDSPMPVIPHQKDTVLEVNGNRTSF
DPLTSTTAGSMSSILASNGAHSGYLSKQETSLLHSSSFLKTTTIRSSMSSQSVTPDLSPA
KSDIGSKTSSMITDGSSPKHQLSPARQYNNPIGLYSADTLREMAEMHKLSLKQRASEGGL
PRGSLPVKDPHVDSASPVYQAVLKTQNKPEDELDDWSRRSSNLQSKSFRILAQMTGTEYM
QDPDEDALRRSSGKSKVAETSKNSLAGTAHEAQYVTSSVWHHPKPHNTDANTGKAKAMAS
KGSVRFGTGASQREASYPSAGQKVPLASSSNPSTPVEHVPVSTRCTPSAMSPASAHQPAT
AAHSAAHQMTLPSAMATSVVHDSISSSCQSLNRHSSTSITYQSKKRGPGQSYISSAPAPH
GPAPYTGYSEAPAPASKPRVVTTASIRPSIYQPAPAPAPAPAPAPAPAPVSVHTYTPSQA
EPSSRPPWITDDSFSQKFAPGKTTTTVTKHILPRGAPVPPSPASAPTYQPPSIPASSQAP
AVARGTIQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVGF
VEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTTCFVCAACRKPFGNSLFH
MEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPF
YSKKDKPLCKKHAHAINV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgactctcaacggacctggaccatgggggttccgactgcaagggggg
aaagacttcaatatgcctctgaccatctccagaattacgcctggcagcaaagcagctcag
tcccagatgaaccagggggacatggtggtagccattgatggggtcaatacagatggaatg
actcacttagaagcccagaataaaataaaatcagcgagttacaacctggctcttactctt
cagaaatcaaaacgtccagctccagttccaacagccaccccaagaattgactctcccatg
cccgtgattcctcatcaaaaggatactgttctggaagtcaatggcaaccgaacaagcttc
gatcctctaactagcacaacagctgggtccatgagtagcattttagcaagcaatggagca
cattcaggctacctcagcaaacaagagaccagccttttacatagttcttccttcttaaag
actactaccattagatcttccatgtcctctcagtccgtgactcctgatctgtcaccagca
aaaagtgacataggttcaaaaacaagctcaatgatcacagatggcagtagccctaaacac
cagttgagcccagcaaggcaatataacaaccccattggcctgtattcagcagacacccta
agggaaatggctgagatgcataagttaagtctcaagcaaagggcttcagaaggtggactt
cccagaggtagcctccctgttaaagatcctcatgtagacagtgcctctccagtatatcag
gctgtacttaaaactcagaacaagcctgaagatgagcttgatgattggagtcgccgttct
tccaacttgcagtccaagtccttccgcatcctggctcagatgacaggaactgagtacatg
caagatccagacgaagatgccctgaggagatcaagtggcaagagcaaagttgcggaaaca
tccaaaaacagccttgcaggtactgctcatgaggcacagtatgtgacgtcaagtgtttgg
catcatcctaagccacacaatacagatgccaacactggcaaagctaaagcaatggcctcc
aaaggttccgtgagatttggaacaggtgcaagtcagagggaagccagctaccccagtgct
ggccagaaagtccctcttgcttcatccagtaacccaagtacccctgttgagcatgtgcca
gtatctacccgctgcaccccttctgctatgtcgcctgcttcagcccatcagcccgctact
gctgctcacagtgctgctcaccagatgaccctgccatcggccatggccacttcagtggta
catgattccatctcatcatcttgccaaagcctcaaccggcattcttccacttccatcacc
taccagtccaaaaagagaggtccaggccaatcttatatatcatcagcaccagctccccat
ggcccagctccttacacaggctacagtgaagccccagctcctgcttcgaaacctagagtt
gtcaccactgccagcatcaggccctcaatttatcagccagctccagcaccagcaccagct
ccggcaccagcaccagctccagcaccagtatctgtacatacttacactccaagccaagct
gagccttctagccgtcctccctggataacagatgactcattctcccagaaatttgctcct
ggaaaaactacaaccactgtcacaaagcacattctaccacggggggctccagtgccgccg
tcacctgcctcagctccaacttatcaacctccttcaattccagcctcctctcaggctcct
gctgttgccagaggaacaattcaaagggctgaacgcttcccggccagcagccggactcca
ctctgcggacactgtaatagcataatcagaggtcctttcttggtagccatgggtcgttct
tggcatccagaggaattcaactgtgcttactgcaagacatccctggctgatgtaggcttt
gtcgaggaacagaacagcgtgtactgtgagcgctgctatgagcagttctttgccccaacc
tgtgccagatgccataccaagatcatgggggaagtgatgcatgcccttaggcagacttgg
cacacaacttgctttgtctgtgccgcctgcaggaagccatttggaaatagcctcttccac
atggaggatggagagccctactgcgagaaagactatgttgccctgttcagcaccaaatgt
catggatgtgacttccctgttgaagcaggagataagttcatcgaagcccttggacacact
tggcatgatacctgcttcatttgtgctgtgtgccatgtgaacttggaaggtcagccgttt
tattcaaagaaggataagccattgtgcaagaaacatgcacatgcaataaatgtctaa
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