Hemicordylus capensis (graceful crag lizard): 128350867
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Entry
128350867 CDS
T08891
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128350867 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128350867 (DHX36)
03012 Translation factors [BR:
hcg03012
]
128350867 (DHX36)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128350867 (DHX36)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128350867 (DHX36)
Translation factors [BR:
hcg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128350867 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
Ntox8
NPHP3_N
AAA_23
AAA_34
ABC_tran
Motif
Other DBs
NCBI-GeneID:
128350867
NCBI-ProteinID:
XP_053165668
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All DBs
Position
3:complement(322953910..323005374)
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AA seq
993 aa
AA seq
DB search
MSYEHRRDWNRGAGPRSSQSSTSTGRGGGGGGGGGGGGRGGGRGRPPPHLKGREIGLWYA
RRQGEKSKEAERQQRAVVRMDERREEQIVQLLNTVQSKNEKEQEAMSWWSDEEGYTKEAP
VKPKPVVEKPVVEKAPEKPRPILEKMSLDQDSAYLLQENKPDIDLDEQLKEELKKKQFDS
RYIEMKKFREKLPSYGMRKELVSLINSSQVTVISGETGCGKTTQVTQFILDDYIERGKGS
SCRIVCTQPRRISAISVAERVAAERAEMCGNGKSTGYQIRLESRLPRRQGSILYCTTGIV
LQWLQSDKQLSSVSHVILDEIHERNLQSDVLMTIIKDLLSIRLDLKVILMSATLNAEKFS
EYFDNCPMVHIPGFTYPVKEYLLEDVIEKLRYTPENTDSRSRWKKRFLQGRVSRQEKEEK
EGIYHERWPDYLKQLTERYSESTIEALEMMDDDKIDLDLIAALIRYIVLEEEEGAILVFL
PGWDNISTLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAE
TSITIDDVVYVIDGGKIKETNFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGQCYHLF
NGLRASLLDDYQLPEVLRTPLEELCLQIKILKLGGIAHFLSKLLDPPSRDAVLLSINHLM
QLNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFFIPL
GKEKVADARRKELSKNSKSDHLTVVNAFKGWEEAQRRGFRCEKDYCWEYFLSSNTLQMLR
NMKGQFAEHLLAAGFVNSRSPRDPKSNTNSENEKLLKAVICAGLYPKVAKIRANFSKKRK
MVKVSTKTDGTVYIHPKSVNVEEAEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGG
DISIQKDKDQDTIAVDEWIVFQSPARIAQLVKDLRKELDDLLQEKIENPQPVDWNNTKSR
DTAVLTAIIDLITTQENEGSRNVAPHFQSKQYS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgagcaccgacgggattggaaccgcggggccgggcctcgctcctctcagtca
tccacctccaccggccgtgggggaggcggcggcggcggcggcggcggcgggggaagaggc
gggggtcggggccgtccccctccccacctgaagggccgagagattggcctgtggtacgcg
cgcaggcaaggcgagaagagcaaagaggccgagcggcagcagagagctgtggtgcgtatg
gatgagcgcagagaagaacagattgtgcagttgctgaacactgtccagagcaaaaatgaa
aaagaacaagaagccatgtcttggtggtctgatgaggaaggatacacaaaggaagctcct
gtaaaaccaaaacctgttgtggaaaaacctgttgtggagaaggctcctgaaaagcctaga
ccaatcttggagaaaatgtccctagatcaagattcagcatatcttttacaagaaaataag
ccagatattgatttggatgagcaactcaaagaagaattgaaaaagaaacaatttgattcc
agatatattgaaatgaagaaatttcgtgagaaactaccttcttatggaatgagaaaggaa
cttgtaagcctcattaacagtagtcaggtaactgttataagtggtgagactggttgcgga
aagacgactcaagttactcagttcattttggatgactatattgagagagggaaggggtct
tcttgccggattgtatgtacccagcctaggaggatcagtgctatctctgtggcggagaga
gtagcagcagaaagggccgaaatgtgcggtaatggaaagagcacaggatatcaaattcgt
cttgaaagccggttaccaaggagacaaggttcaattttgtactgcacaacaggaattgtc
ctacagtggctccagtcagacaagcaattatccagtgttagtcacgtaatccttgatgaa
atccatgagagaaatcttcaatcagatgttttaatgaccattattaaagatctcctaagt
atacgactagacctgaaagtaatattgatgagtgctaccctgaatgctgagaagttttcc
gaatattttgacaattgtcctatggtccatattcctggctttacctatcctgtcaaggag
taccttttggaagatgtgattgaaaagctacggtacactccagaaaatacagattctcga
tcacgttggaaaaaaaggtttctgcaggggcgtgtaagcaggcaggaaaaggaagagaaa
gaaggaatctatcatgaacgatggccagattatttaaagcagttgacagaaaggtattca
gaaagtacaatcgaagcattagaaatgatggatgatgataaaattgatcttgatttgatt
gcggcactgatcagatatattgttcttgaggaagaggaaggtgcaatattggtatttctc
cctggatgggacaacattagcactctacatgaacttctcatgtctcaagttatgtttaag
tcagataggttcatcatcatacctttgcattcactgatgcctactgttaaccagacccag
gtttttaaaaagacgccccctggagtccgtaaaattgtaattgcaaccaacattgctgag
actagcatcaccatagatgatgtggtatatgttatagatggaggaaagataaaggaaacc
aactttgatacacagaacaacattagcacgatggctgccgagtgggttagcaaagcaaat
gccaagcaaaggaaaggaagagcagggagagtccagccaggtcagtgctatcatttgttc
aatggtctgcgtgctagcctgctggatgattatcaattgccagaagtcctgagaacgcct
ttggaagaactctgtttgcagatcaagattttaaagcttggaggaattgctcactttctg
agcaagcttttggatccaccatcacgtgatgctgtgttactgtctataaatcatctcatg
caactgaatgccttggacagacaagaagaattgactccccttggagtccacttggcccga
ttaccagtggagccacatataggaaaaatgattctctttggagcattattctgttgctta
gatcctgttctcaccattgcagccagcctcagcttcaaggacccttttttcattcccttg
ggtaaagaaaaagtggcagatgcaagaagaaaggaactgtcaaagaactctaaaagtgat
caccttaccgttgtgaatgctttcaagggttgggaagaagctcagcgacgcggcttcagg
tgtgagaaggattattgctgggagtattttctttcttcaaacactttgcagatgctgcgt
aacatgaaaggacagtttgctgaacatctccttgcagctgggtttgtgaatagtagaagc
cccagagatcccaaatcaaatactaattcagaaaatgagaagttacttaaagctgttatc
tgtgctggtttatatccaaaggttgcaaagatccgagcaaacttcagcaaaaagaggaag
atggttaaagtttccactaaaacagatggaactgtttatattcatcccaaatctgtaaat
gttgaagaggcagaatttcattacaactggcttgtttatcatttgaaaatgagaaccagc
agcatatacctgtacgattgcacagaagtctctccatattgcctcttgttctttggagga
gacatttctatccagaaggacaaagatcaggatacaattgctgtggatgaatggattgta
tttcagtctccagcaagaatagcacagctagtgaaggatttaagaaaagaattggatgac
cttctacaagagaaaatagaaaacccacagcctgtggactggaacaatactaaatcaagg
gacactgcagtgctgacagccattatagacttaatcacaacacaggagaatgaaggttcc
agaaacgttgccccccacttccagagcaaacaatacagttag
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