Hemicordylus capensis (graceful crag lizard): 128350905
Help
Entry
128350905 CDS
T08891
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128350905 (IFT88)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
128350905 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_6
TPR_7
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_17
ARM_TT21_4th
TPR_11
TPR_10
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
ARM_TT21_N
RPN7
ARM_TT21
TPR_15
HAT_PRP39_C
DUF6584
HEAT_Nup120
ARM_TT21_C
Consortin_N
MtxA_C
MIT
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
128350905
NCBI-ProteinID:
XP_053165750
LinkDB
All DBs
Position
3:34219385..34305354
Genome browser
AA seq
837 aa
AA seq
DB search
MMKNVHLAPETDEDDLYSGYNDYNPTFDTEDLENDPAFQRAVKTSHGRRPPVTAKVPGTS
ALRPLATGYGSKTTLSSSMSRPMTAAVQDGIARPMTAVQAAGYTKAASRGSAFDPLGQAR
GSAPPLEMKNEDSPEGKIKQLEKKVNELVEESCIAHSCGDLKLALEKAKDAGRKERALVR
QREQTMSPANVNLDLTYTVLFNLASQYSANEMYAEALNTYQVIVKNKMFVNGGMLKVNMA
NIYLKQRNYSKAIKFYRMALDQIASVHKEMRIKIMQNIGIAFIKTGQYTDAINSFEHIMS
TSPNLKAGFNLILCYFATGDQEQMKKAFQKLISVPLEIDDDDKYISPADDPHTNLLMEAI
KNDSLRQMERERKATAEKYIMTAAKLIAPAIETSFAIGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKESRVKSAAATNLSFLYFLENEFTQANIYADLAVNS
DRYNPSALTNKGNTVFACGDYEKAAEFYKESLRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLFQIASIYEIMEDPNQAIEWLMQLISVVPTDSHALAKLGELYDNE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIHYFERAALIQPTQVKWQLM
VASCYRRSGNYQKALDTYKAIHKKFPDNAECLRFLVRLCTDMGLKETQEYAIKLKRVEKL
KEIREQRVKSGRDGSARARREGSAGGASLSPENRPSLVSEVVRDPGSINVKGERLSSKLK
SLPGTNDPYESSTNKEIDASYLDPLGPQIERPKTALKKKMDEDEFADEELGDDLLPE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaatgtccacctggcacctgagacagatgaagatgatctttattctgggtac
aatgactataatcctacctttgacacagaggatttagagaatgatccagcttttcagcgt
gctgtcaaaactagtcatggtagaagaccaccagttacagccaaggttccaggcacatca
gcgttgcgaccattagctactggatatggatcaaagacaacactgtcttcatcaatgagc
agaccaatgactgcagctgtacaggatggtattgctcgacctatgacagcagtgcaggca
gcaggttacaccaaagcagcttcaagaggttctgcatttgatccccttggccaagcaaga
ggttctgctcctcccttagaaatgaaaaatgaagatagtccagaaggaaaaattaaacag
ttggaaaaaaaggtaaatgagttggttgaagaaagctgcattgctcacagctgcggagac
ctcaagttggctcttgaaaaggcaaaagatgctggaagaaaggaaagagcattagtaagg
caacgtgaacagactatgtctcctgcaaatgtcaacctagatcttacatatactgtactt
ttcaatttggccagccaatattctgctaatgaaatgtacgcagaagcattaaatacctat
caggtcatcgtgaaaaataagatgttcgtcaatggagggatgctgaaggtgaacatggca
aatatttatttgaaacaaagaaactattcaaaagctataaaattctaccgtatggctcta
gatcagattgcaagtgtccataaagagatgaggattaaaataatgcagaacattggaatt
gcatttattaaaactggccaatatacagatgctattaactcatttgaacacattatgagc
acatctccgaacctgaaagcaggcttcaacttgatcctttgctattttgctactggagac
caagaacaaatgaaaaaagccttccaaaagttgatttcagttcctttggaaattgatgat
gatgacaaatatatttcaccagctgatgatccacatacgaacctattgatggaagctatt
aaaaatgacagcttaaggcaaatggagcgtgaaaggaaagcaacagcagagaagtatata
atgacggctgctaaactcatcgcaccagcaattgaaacatcgtttgctataggctatgac
tggtgtgttgaagtagtaaaagcttctcagtatgtggagttagccaatgacctggaaatc
aataaagcaattacatatctgaggcaaaaggattttaatcaggcggtggagactctaaag
atgtttgaaaaaaaggaaagtcgagttaaaagtgcagctgcaacaaacctttcatttctt
tatttcttggagaatgaatttacacaggcaaacatctatgcagatttagcagtaaattct
gatagatacaacccatctgctctcacaaataaaggaaacactgtttttgcatgtggagac
tatgagaaggcagcagagttctataaggaatctttaaggaatgattcttcatgtactgaa
gcactttataacattggtttaacttacaaaaaattgaaccggttagatgaggcgttggac
tcttttctgaaacttcacgctatccttcgaaacagtgcccaggttctcttccaaatagca
agcatatatgaaataatggaggaccctaatcaagccattgagtggcttatgcaactcatc
agtgttgttccaacagattcacatgctttagcaaagcttggagaactctatgataatgaa
ggggataagtctcaagcatttcaatattactatgagtcctatcggtatttcccttcaaac
attgaggtcattgaatggcttggagcctattacattgacacgcaattttgtgaaaaagct
attcactactttgaaagagcagcgctcattcaaccaactcaagtgaaatggcagttgatg
gttgctagctgctacagaagaagtggtaattatcaaaaagctcttgatacgtacaaggcg
attcacaaaaagtttccagataatgctgaatgtctacgcttcttagtccgactctgcaca
gacatggggttgaaagaaacccaagagtatgcaataaagcttaagagggtggaaaaactg
aaagaaataagggagcagcgtgtcaaatctggcagagatggtagcgcccgtgcccgcaga
gaaggaagcgctggtggtgcttccctctctcctgaaaataggcctagtttggtctcagaa
gtagtaagagatcctggtagcatcaatgttaaaggggagcgattaagttctaaactgaag
tccttgccagggacaaatgatccctatgaaagcagcactaacaaagaaatagatgcttct
tatctggatcctcttggaccacagattgagagacccaaaactgcactaaagaaaaaaatg
gatgaagatgaatttgctgatgaagaacttggagatgatttgcttccagaataa
DBGET
integrated database retrieval system
