Hemicordylus capensis (graceful crag lizard): 128351237
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Entry
128351237 CDS
T08891
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04136
Autophagy - other
hcg04140
Autophagy - animal
hcg04145
Phagocytosis
hcg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128351237 (ATG16L1)
04140 Autophagy - animal
128351237 (ATG16L1)
04136 Autophagy - other
128351237 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128351237 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128351237 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
hcg03029
]
128351237 (ATG16L1)
Membrane trafficking [BR:
hcg04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
128351237 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
128351237 (ATG16L1)
Mitochondrial biogenesis [BR:
hcg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128351237 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
ATG16
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
eIF2A
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_DCAF12
Ge1_WD40
NBCH_WD40
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_NWD2_C
Beta-prop_HPS5
ASA1
PUMA_CC
Fez1
AP5B1_middle
CCDC93_CC
HEF_HK
Tricorn_N
PALB2_WD40
HTH_6
Vma22_CCDC115
Beta-prop_WDR19_2nd
CCDC186_middle
Phostensin_N
YabA
KASH_CCD
CLIP1
TMA17_helical
Motif
Other DBs
NCBI-GeneID:
128351237
NCBI-ProteinID:
XP_053166560
LinkDB
All DBs
Position
3:complement(291268190..291300601)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRGVSLPAWKRHILDELRQRDRLQTQAFEEIILRYNKLLEKSDLHTVLADKLQAEK
YDLPIRHESSPGHDGARNDAHLQEIAQLRIKHQEELTELHKKRGELAQSVIDLNNQIQQK
DREMQMNDAKIVEYVQKIAELEMECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RRTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQAKLQKELAEAAKEPLPIEQDDDI
EVLTDETSDPAEDTSPVRAVGRTASKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDTAR
RRSLSSCPAPQDNVDVHPGVSKEMRVPNTALYVFDAHDGEVNAVQFSPGSRLLATGGLDR
RVKLWDVFGDKCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDHRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTECVVQEMELLGRITALDLNPERTELLTCSRDDQLKIIDLRVNVIKQ
TFSAPGFKCGSDWTRAVFSPDGNYVAAGSADGSLHVWNVLTGKVERVLSKHHSNSINAVA
WSPSGAHVVSVDKGSKAVLWSDF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggcctcaggggtgtgagcctccccgcctggaagcggcacatcctggacgaa
ctgaggcagcgggaccggctgcagacgcaggccttcgaagagatcatcttgcggtataac
aagcttctggagaagtcggatctccatacagtgctggctgacaagctacaagcggaaaag
tatgacttgccaatccggcatgagagcagtccaggacatgatggtgcaaggaatgatgct
cacttacaggaaatagcccagttaagaatcaaacatcaagaggaactgactgagctgcac
aagaaacgtggcgagttggcccaatctgtgattgatctaaacaaccaaatacagcagaaa
gatagagagatgcaaatgaatgatgcaaaaattgtagaatatgtgcaaaagatagctgag
ctggaaatggagtgccaggagctgcgtaacaagctacaggatctcgaaagagccaatcag
actcttaaggatgagtatgatgctctccagatcacctttacagctcttgaagagaaactg
agacgaactactgaagataaccaagagttggtaacacgctggatggcagagaaggctcag
gaagctaatcggctcaatgcagaaaatgaaaaagattcaaggagacgacaagccaagctc
cagaaggaactagcagaagctgcaaaagagccattgccaattgaacaggatgacgatatt
gaagtgcttacagatgaaacctccgatccagctgaggacacatctccagtgcgtgctgtt
ggccggaccgctagtaagcgactctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcactcttctgatactgccagg
aggcgctctttgtcctcatgtcctgctcctcaagacaatgtggacgtacatccaggtgta
agcaaagagatgcgagtccctaacactgcgctgtatgtctttgatgctcatgatggggag
gtgaatgcggtgcagtttagtcctggctctcggttactggcaacgggtggcttagaccgg
agagtcaaactctgggacgtctttggagacaagtgtgagcttaaaggttccctatccggc
agtaatgcagggattacgagcatagaattcgacagtgctggatcttatctattggcagct
tcaaatgactttgccagtaggatttggaccgtagatgatcatcggttacggcatacgcta
acagggcacagtgggaaagtcttgtcggccaaattcctgttggacaatgcgcgcattgtg
tctgggagccacgacagaactctcaagctgtgggacctgcgcagtaaagtctgtataaag
acggtgtttgcaggctccagctgcaatgatctagtctgcacagagcaatgtgtgatgagt
ggccactttgacaagaaaattcgcttttgggatattagaactgagtgtgtagtacaagag
atggaactgcttggtaggattacagctctagacctcaacccagaaagaacagagctcctt
acgtgttcccgagatgatcagttgaagattattgatctacgagtcaatgttatcaaacag
actttcagtgccccggggtttaaatgtggatctgattggaccagagctgtattcagccct
gacggaaactatgtggcagctggctcagcagacgggtccctccatgtttggaatgtgctc
acagggaaagtggagagggtgctctccaagcatcacagcaactcaatcaatgctgtggca
tggtcaccatctggagcccacgtggtcagtgtggacaaaggtagcaaagctgtgctgtgg
tctgacttttga
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