Hemicordylus capensis (graceful crag lizard): 128351292
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Entry
128351292 CDS
T08891
Symbol
DSCAM
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128351292 (DSCAM)
Cell adhesion molecules [BR:
hcg04515
]
Immunoglobulin superfamily
DSCAM family
128351292 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Sp38
V-set_CD47
Ig_C17orf99
Interfer-bind
fn3_2
ChitinaseA_N
C2-set_3
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
128351292
NCBI-ProteinID:
XP_053166658
LinkDB
All DBs
Position
3:complement(93674169..94253468)
Genome browser
AA seq
2008 aa
AA seq
DB search
MWILAAVLFQSILNVSSEELHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSTVEAYITVVSWEKDTVSLVSGSRFLITSTGA
LYIIDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFEHRKAMTGQ
RVELPCKASGHPAPKYRWLKDNVPWEPDSRFRPTVTGLLIENTRPSDSGNYVCEVWNNYG
TAEVIGRLHVKQPLKATISPRKVKSSVGSQVSLSCSVAGTEDHELFWYRNGEIINPGNNV
RILGVNHETLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEGVSLMCNVKGTPLPTITWTLDEDPIIKDGNHRISQIITSEGNVVSYLNISSTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTFIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIFRKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAQGEKPIIVRWEKEDRIINPEMSRYLVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHASSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQEVQLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEVYTLDNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSSPPENVQAIATSPETISITWSTLAKDALNGILQGFRVIYWANLLDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPIKLNGVIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIILPCKAVGDPAPTIKWM
KESNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCLATNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLTKSYIVYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILIGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDAGRVTNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVPGTSR
DLGLGQTCLEPQKSRTLKRPTVLEPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAK
MSSSQESLLDSRGHLKGSNPYAKSYTLV
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgccgtcttgttccagagcatcttgaatgtttccagtgaagagcta
catgccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccaca
gggaccctggtgccctgtcctgcagcagggatccctcctgtgacgctcagatggtaccta
gcaacgggcgaggagatctacgatgttccagggatccgccacgtccaccctaatggcact
ctccaaattttccctttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggcc
gttttacgggaaccatatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatcccctccactgtggaggcatacatcactgttgtctcatgg
gagaaagacacagtctcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattatagatgtacagaatgaagatggattgtataattaccgatgtatcacacgg
cacagatacactggagaaacacgacagagcaacagtgctagactttttgtatcagaccca
gcaaactcggctccatctatcttggatgggtttgaacaccgaaaagccatgacaggtcag
cgagtggagctgccttgcaaagcctctggacacccagcaccaaagtaccgctggctgaag
gacaatgttccctgggagcctgacagcaggttccggcccacagtgacaggcctgctgatt
gaaaacacacgcccgtcagactcaggcaactacgtgtgtgaagtgtggaataactacggt
actgctgaggtgataggccgtttgcatgtcaaacagcctctaaaagccacaatcagtcca
cggaaagttaagagcagtgttggtagtcaagtgtccttgtcctgcagtgtggctggaaca
gaggaccatgaactcttctggtaccggaatggtgaaatcatcaaccctgggaacaatgtg
aggatccttggggtcaatcatgagactcttattatggatggcatggccaaaagcgatggt
ggggcataccagtgttttgtacgcaaggacaagatgtctgcacaagactatgttcaggtg
gtgctagaagatggaactcccaaaataatttctgcttttagtgagaaggtagtaagtcca
ggagaaggtgtttccttgatgtgtaacgtgaaaggaactcctcttcctacaatcacatgg
acattagatgaagatcccatcattaaagatggcaaccaccgcatcagccagatcatcacc
tctgagggcaatgtggtcagctacctgaatatttccagcactcaggtccgagatggcggg
gtgtatcgttgcactgccaacaattctgctggagtcgtcctgtaccaggctcgaataaac
gtaagagggccagcaagcattcgaccaatgaaaaatatcacagcaatagcagggcgggat
accttcattcattgtcgagtcattggctatccgtattactccatcaagtggtacaagaat
tctaaccttcttccctttaaccatcgtcaagtagcattcgaaaacaatggaacattgaag
ctctcagatgtacaaaaagaggtggatgagggtgaatacacatgcaatgttctggttcaa
ccccagctgtccactagccagagtgtgcatgtgactgtgaaagtacctccttttatccag
ccttttgaatttccaaggttttccattggacagagagtcttcattccatgtgttgtggtc
tcaggggatttgccaatcacaatcacctggcagaaggatggcaggccaatcccagccagt
cttggggtaaccattgacaacattgacttcaccagctccttaaggatttctaatctttcc
cttatgcacaatgggaattatacctgtatagcacgaaatgatgcagcagccgtggagcac
caaagccaattaattgtgagagttccccccagatttgttgttcagccaagtgatcaagat
gggatttttagaaaagctgtgattctcaactgctctgcggaaggctatcctgtccctaca
attgtctggaagtattcaaaaggtgctggagtcccccagttccaaccaattgccttgaat
gggcgtatccagcttctcacaaatggctccttgttgatcaagcatgtgctggaggaagat
agcggatactacctctgcaaggtcagcaatgatgtgggggctgacgtcagcaagtccatg
tacctcactgttaaaattcctgcaatgataacctcctatccaaacaccaccttggcaaca
cagggtcaaaagaaagagatgagttgcacagcacaaggagaaaaacccatcattgtccgc
tgggagaaagaagacagaataattaatcctgaaatgtcccgctatcttgtttccaccaag
gaagtgggtgatgaagtgatctctactctgcagattttgccaacggtgagagaagactct
ggtttcttctcctgccatgccatcaattcatatggggaggaccgtggaataattcagctc
actgtgcaagaacctccagatcctccagaaatagaaatcagagaggtgagagcacgcagc
attgccctcagatggacgatgggatttgatggaaatagtccaatcacaggctatgatata
gaatgcaagaacaagtctgactcctgggattctgttcaaagaaccaaagatgtttcccca
cagctgaatcaggccactatcattgacctccatgcttcctcaacctacaacattcgcatg
tatgcaaaaaaccgcattggaaagagtgaagccagtaatgagcttactatcaccacagat
gaagcagctcctgatggaccacctcaagaagttcagcttgagcccatatcttcacaaagc
attagggtaacatggaaggctccaaagaaacatttgcaaaatgggattattcgtggatac
cagattggttatcgtgaatacagtgcagggggcaatttccagttcaacatcatcagtatt
gataccaccggggacagtgaagtttacactttagataacctgaaaaaattcacccagtat
ggcatggtggtgcaagcatgtaatcgagctggaataggaccatcttctcaggaaattatc
accactacactggaggatgttcctagttcccccccagagaacgtccaagcgattgccacc
tcccctgaaaccatctctattacctggtccactcttgccaaagatgccctcaatggaatt
ctacagggatttagggttatatactgggctaatcttttggatggagagctgggagaaatt
aaaaatgttaccactacacagccctcattagagcttgatggcctggaaaagtacaccaac
tatagcatccaggtgttggcattcacacgagctggggacggggtcaggagtgagcagatt
ttcacgcgcacaaaagaggatgttccaggtcctcctgctggggttaaagcagctgcagct
tcagcctccactgtgtttgtatcctggttacctcccataaaattgaatggtgtcatccga
aagtatactgtattctgctctcatccataccccacagtaatcagcgaatttgaagcttct
cctgactcattttcctatcgaatccccaatctgagtcggaatcgacaatacagcgtctgg
gtggtagctgtgacagctgcaggaaggggcaacagcagtgagattatcaccgtggaacca
ctagctaaagccccagccagaattctgacattcagtggcactgtaacaaccccatggatg
aaagatattatcctcccatgtaaggctgttggggacccagctcctaccatcaaatggatg
aaagaaagtaacgggacacccagtctagtgatgattgatgggcgaaggagcatctttagc
aatggcagcttcgtaattcgtactgtgaaagcagaagattcaggatattacagctgtttg
gccactaacaattggggatcagatgaaattattttgaatttgcaggtacaagttccaccc
gaccagcctagacttactgtgtccaaaaccacatcttcctcaattactctttcctggatt
cctggcgacaatggtggcagttctattcgaggttatatactgcagtactcagaggacaac
agtgaacagtggggcagtttccccattagccctagtgaacgttcctaccgtttggagacc
ttgaagtgtggcacctggtacaagttcacgctgacggctcagaatggtgtggggccggga
cgcatcagtgagatcatagaggccaaaacacttgggaaagaaccacagttttcaaaagaa
caagaactctttgccagtattaacaccactcgagtaaggttgaaccttattggctggaat
gatggtggctgtccaatcacctcctttactctggaatacaggccatttgggaccacagta
tggacaacagctcagcgaacatctctcactaaatcatatatagtgtatgatcttcaagag
gcaacctggtatgaactgcagatgagagtctgtaacagtgccggctgtgctgagaaacag
gccaaatttgcaacgctcaattatgatgggagtacaatccctccactcattaagtcagtt
gtccaaagtgaggaaggtctggcaaccaatgaagggctaaagatgctcgtgaccatttcc
tgtatcttgattggggtcttgctgctttttgtgcttctgctggttgtgaggaggaggagg
agggaacagagactgaagagactcagagatgcaaagagtctggctgaaatgcttatgagc
aagaatacaaggacatcggacacacttaacaagcaacagcagacactgagaatgcacata
gacattcccagagcgcagcttttgattgaagagagggacacaatggagaccattgatgac
agatctacagttctgttaactgatgctgactttggagagacatcaaaacagaaatcactg
actgtcactcacacagtacactaccagtctgtctcacaggccactggaccattggtggat
gtttctgatgcccggccaggaacaaatcctacaacaagaaggaatgcaaaagctgggccc
acagctcgcaacagatacgcgagtcaatggactctcaacagaccccatcccacgatatca
gcccacactttaacaacagattggaggctaccaacccccagggccacagggtctgtggat
aaagagagtgacagctacagtgtcagtccatcacaagatacagatcgagcaaggagcagc
atggtctccacagaaagtgcctcctccacatatgaagagctagcaagagcatatgaacat
gccaagatggaagagcagctgcggcatgccaagtttaccatcacggaatgcttcatatca
gacacctcatcggagcagcttacggcagggactaatgaatacacagacagcctaacctca
agcaccccatcagaatcggggatctgcaggtttactgcatcacctcccaaacctcaggac
gcagggcgcgtgacaaacatggcagttccaaaggcacatcggccaggtgacctcatgcat
ttgccaccgtatcttcgaatggactttttgttaaaccgaggagttcctggcactagcaga
gacctaggtttagggcaaacctgtctggaacctcagaaaagccgaaccttgaagcgtcca
acagtcttggagccaatacctatggaaacttcatccacaagagaagtacagtcatggcaa
cctggtgccgtagcaacattacctcagcgagaaggagctgagctaggacaggcagctaaa
atgagcagctctcaagaatcgctgctggactctcggggccatttgaaaggaagcaatcct
tacgcaaaatcttacaccctggtataa
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integrated database retrieval system
