Hemicordylus capensis (graceful crag lizard): 128351879
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Entry
128351879 CDS
T08891
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128351879 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128351879 (TAF5)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128351879 (TAF5)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128351879 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
128351879 (TAF5)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128351879 (TAF5)
STAGA complex
128351879 (TAF5)
TFTC complex
128351879 (TAF5)
SAGA complex
128351879 (TAF5)
SLIK complex
128351879 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
Cytochrom_D1
CDK5RAP3
WD40_like
VPS8_N
eIF2A
RAB3GAP2_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
128351879
NCBI-ProteinID:
XP_053167854
LinkDB
All DBs
Position
3:complement(282690356..282718700)
Genome browser
AA seq
799 aa
AA seq
DB search
MAALPEEPAEAVTVKPDPDAGVAPPPPPPPPPPPPVPPQSPATAAVAAPPLAPSVAATPT
EGEPLDSKPPVAVSAAPPPASQLPTDRQTLLAVLQFLRRSNLRESEEILRREARLLADEV
AADPSPSASGAPAAHGGEGQESSLGIATAGAGDVLLSSVTFGQTGAAVPPATVAAPPAVP
LGPPGKVGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFY
PLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRILSSLTKKEHMRGNETMLDFR
TSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG
EAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKSKKDSMGSKSKKQDPNA
PPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD
SSMIVGGFADSTVRVWSVTPKRLRSVKSAADLSVIDKESDDVLERIMDEKTASELKILYG
HSGPVYGTSFSPDRNYLLSASEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFV
SGGHDRVARLWATDHYQPLRIFAGHLADVTSTRFHPNSNYIATGSADRTVRLWDVLNGNC
VRIFTGHKGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTETIYALKFSR
DGEILASGSMDNTVKLWDAIKAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKSTPVT
HLHFTRRNLLIAAGAYGPQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctgccggaggagccagccgaagcggtgaccgtgaagccagaccctgatgcg
ggagtcgccccaccgccgccgccccctcctcctccgcccccacccgttcctcctcagtct
ccggcgacagcagcagttgctgctccccctctcgccccctcggtggccgctacccccaca
gaaggagagccgctggactcgaagccgcccgtggccgtcagcgctgcaccgccgcctgcc
tcccaactgcccaccgaccggcagacgctgctggctgtgctgcagttcctacggcgaagc
aaccttcgggagtcggaagagatcctccgccgggaggcgcggctgctcgccgacgaggtc
gcggctgatcctagtccctcggcgtctggagccccagcagcccatggcggggaaggacag
gagtccagccttgggatcgccaccgcaggagccggggatgtgctgctcagctccgtcacc
tttggccagaccggggcggccgttcctcctgcgaccgtcgcggcacctcctgcagtgcct
ctgggtcctcctgggaaagttggagtccttgtagaagatcagccagatgtgagtgcagta
ttgtctgcctacaaccagcagggagacccagcactctatgaagagtactacagtggactg
aaacacttcattgaatgtgccctggactgccatcgagctgagttatcacagcttttttat
cctctctttgtacatatgtatttggaactagtctacaatgggcatgaaaatgaagcaaag
tccttctttgaaaagtttcatggggatcaggagtgttattaccaagatgacttgcgcata
ctatcaagcttaaccaaaaaagaacacatgagagggaatgaaacaatgctggatttccga
acgagcaagtttgtgctgcgcatatcccgtgactcttaccagctcttgaagagacacctt
caggagaaacagaacaatcaaatctggaatattgttcaagagcacctttacattgatatc
tttgatggaatgcctcgcagtaaacaacagattgatgctatggttggaagtttagcaggg
gaggcaaaacgggaggctaataaagcaaaggtgttttttggcttactaaaagaaccagaa
attgaattgcctttggatgatgaagatgaagagggcgagaatgaagaaggcaagccaaaa
aagaaaaagtctaaaaaagacagcatggggtcgaaaagtaaaaagcaggatccaaatgcc
cctcctcaaaatagaattcctcttcctgagctaaaggactctgacaagttggataaaata
atgaatatgaaggaagccactaagcgtgtgcgtcttggtccagactgcttgccttccatt
tgtttttatactttccttaatgcttaccagggcctcacagcagtggatgttacagacgac
tctagcatgattgtaggaggctttgctgactctacagtcagagtatggtctgtgacaccc
aaaaggttgcgcagtgtaaaatcagcagcagatctcagtgtcatagataaagaatcggat
gatgttttagaaaggatcatggatgagaaaacagcaagtgagttgaagattttatatggt
cacagtggacctgtctatggtaccagcttcagccccgataggaactacttgctgtcagct
tcagaggatggcactatcagactgtggagtctcttaaccttttcttgtctggtagggtac
aaaggacacaactatcctgtatgggacacacaattctctccttatggatattactttgta
tctggtggtcatgacagagtggctcgcttatgggctacagatcactaccagcctttgcgg
atctttgccggccatcttgcagatgtcacatctacgcgttttcatccaaactccaactac
attgctacaggctcggcagataggactgtgcggctgtgggatgttctgaatggaaactgt
gtaagaatcttcacgggacataagggacctgttcattcattagcattttctcctaatgga
agattcttagcaactggagcaacagatggaagggtgcttctgtgggatattggtcatggt
ttgatggtgggagaactgaaaggacacacagaaacaatctatgcactcaagtttagtaga
gatggagagatcttagcatcaggttcaatggacaacacagtgaagttgtgggatgccata
aaagcctttgaggacttggaaacagatgattttactactgctactggacatataaacctg
cctgaaagctctcaggacttgctgttgggtacatacatgaccaaatcaacccctgttaca
catctccattttactcgcagaaacttactaattgctgctggggcatatggtccccagtga
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integrated database retrieval system
