Hemicordylus capensis (graceful crag lizard): 128351910
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Entry
128351910 CDS
T08891
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128351910 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128351910 (VPS8)
Membrane trafficking [BR:
hcg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128351910 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
zf-RING_Vps41
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
128351910
NCBI-ProteinID:
XP_053167908
LinkDB
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Position
3:293183878..293334456
Genome browser
AA seq
1410 aa
AA seq
DB search
MEDELKTESQNLDPDQGSCSVSDESSLQFLSQEAPSPKLSVTELSRELDSKSELIDDKEF
DIPQVDTPPTLESILNETDDEEEPFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDRTHLK
RKKKLHDSFSIHGSVIRLSLLKGISAQIVSAAAKVDAGLPTAIAASSLIAVGTSHGLALI
FDPNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSIID
AHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIE
PLHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFV
AVQTSVNPVLAFCRGDVVHFLLVKRDDSGAIHVTKQKQLHLHYDLINFTWINSRTVVLLD
SVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISN
CGGQIFYLGTKSVHVMTLRSWRERIDHLLKQECLNEALALAWSFHEGKAKAVVGLSGDEQ
KRKAVVADRMVEILIHYADRTMKKCPDQGKIQVMELHFQDMVPVIVDYCLLLQRMDLLFS
QMYDKMSENSVAKGVFLECLEPYILSDKLVGITAQIMKDLLLHFQDKNLMANMEACIVHM
DITSLDINQVVLMCWENRLYDAMIYVYNSGMNDFITPMEKLFRVIAPPLGAGKSLSDEQV
IMGNKLLVYISCCLAGRAYPLGNIPEDLVPLVKNQVFEFLIRLHSAEAPTDEEVYPYVRT
LLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLA
RQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIQM
AEKAEFYQICEFMYEREHSYDKIIDCYLRDPLRKEEVFTYIHNILSIPGYSTEEKQSVWQ
KTMKHIEELLSVSPSKAADLISIHFSDQIEQIIQNLQDQYLLFQFLKSLLDPREGINQDL
LQLSPSITEQFIKLLCQYDPDQVLEILRFLEFYRLEETIQVTQKYQLHEASAYLLEKKGD
INGAFLVMLEWLQSKLLTLTREDEKSIEFLSLKDIEDTLAKTIALCQRNSHNLNQEQREA
LWFPLLEAMMSPQRSSCSALLCHYSEFLKNLTMQVLNNMAAFIALPLILQRILQDPVYGR
GKLGEIQGLVLGMLDSFNYEQTLLETTTSLLNHDLHWSLRNLKASVTRGLNPKQDYCCIC
LQQYKRRQETADQIIVFSCGHLYHSLCLLSKECGTETKGQMRWTCFKCNAGNKGGKLSVT
SSEAKKRTPVSLAQASSESLLDPQQAQAFDQLCRLYRGTSRLALLTELSRDNGGEKHGLF
HVSHGDPALNSVFQNETFQLHLTPPPLLED
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaactgaagacagagagtcaaaaccttgatccagatcaaggttcttgttct
gtgtcagatgaatcaagtctgcagtttttgagccaggaagccccttctcccaaactgtct
gtgactgaactgagccgggagttagactcaaagagtgagctgatagatgacaaggagttt
gatattccccaggttgatacacctccaaccctggaaagtattttaaatgagactgatgat
gaagaggagccatttgttcttgaggatccatctcttctaaacattgataatattgacact
cactcatatgatacctcttctgtagcaagctctgatagcggagataggacacacctaaaa
aggaagaagaaacttcatgattctttttctatccatggctcagttatacggctgtcactt
ttgaagggaatctcagcacaaatagtatctgcagcagcaaaagtggatgctggcttgccc
actgcaatagcagcgtcaagtctcatagcagtgggaacatcacatgggctagcactgata
tttgatcccaaccaggctcttcggctttgtttgggcagtactgcagttggagcacaatac
ggggccatatctgctctcagtatcaacaatgattgctcaagacttctctgtggttttgca
aaaggacagattacaatgtgggatttggccagtggaaagcttttgagatcaataatagat
gctcatcctccaggaacagcgattttacacattaagtttacagatgacccaactctagca
atttgcaacgacagtggaggttcagtatttgaactgtcattcaagcgagtcatgggtgtg
agaacatgtgagtcgcgctgcttgttcagtggttccaagggcgaagtttgctgcattgag
cctttacatgcaaagactgaactaagggaccatcccattactcagtactctctcctggca
atggcttccttaacaaagattcttgtcattggcctgaaaccatctttgaaagtgtggatg
acttttccatatggtcgtatggacccatccagtgttccattgctggcatggcattttgtt
gctgtgcagacatctgtgaatcctgtacttgccttctgtcgaggagatgttgtacatttc
cttctagttaagagagacgactctggagcaatacatgttacaaaacagaagcaactccac
ctgcattatgacctcatcaattttacttggataaactctcgcacagttgtacttctggac
agtgtggaaaagctgcatgtgatagatcgtcagacgcaggaagaacttgaaactgtggag
atttcagaggttcagttagtttacaacagcagccacttcaaatcactggcaacaggaggc
aatgtcagccaagcactggccctagtgggagagaaagcctgctaccagtcaattagcaac
tgtggtggtcaaatattttatttaggtacaaagtctgttcatgtgatgacactgaggagc
tggagagagagaatagatcacctcttgaaacaagaatgtcttaatgaagcactggcgctt
gcttggtcctttcatgaagggaaagccaaggctgttgtaggattatctggagatgaacag
aaacgaaaggctgttgttgcagacagaatggttgaaatccttatccattatgctgatcga
accatgaaaaagtgtcctgaccagggtaaaatccaagttatggagctacacttccaggat
atggtgcctgtcattgttgattactgccttctgcttcagcgaatggatctgttatttagt
cagatgtatgacaagatgagtgaaaattctgtggcaaagggtgtctttttggagtgtctt
gaaccatatattttaagcgacaaattggtgggaatcacagctcaaattatgaaggatttg
ctgcttcacttccaagataagaatttaatggcaaacatggaggcttgcattgtacatatg
gatatcaccagcctagatataaatcaggttgttctcatgtgttgggaaaatcgtctatat
gatgccatgatttatgtctacaacagtggaatgaatgattttatcactcccatggagaaa
ttgtttcgagtcattgctcctccacttggtgctggaaaatctctctcggatgaacaggtc
attatgggcaacaagcttctcgtctatataagttgttgtttggcaggccgcgcttatcca
ttgggcaatattcctgaagatctggtgcccctggttaaaaaccaggtctttgaatttctt
atccgtttgcactcagctgaggcacccacagatgaagaagtttacccctatgtacgtaca
ctgctgcattttgatacacgggagttccttaatgttcttgcactgacatttgaagacttc
aagaatgacaaacaagctgtagagtaccagcagagaattgtggacattctgctcaaggtt
atggtagagaactctgattttaccccatcacaagttggatgtctctttactttccttgcc
cggcagcttgctaagcccaacaacacactgtttgtgaacaggacactgtttgaccaggtc
cttgaatttctttgcagtcctgatgatgattcaagacactctgagagacagcaggttctc
ttagaattgcttcaagctggaggcatagtacaatttgaagagaacagactcattcagatg
gcagaaaaagctgaattctaccaaatctgtgagtttatgtatgaacgggaacatagctat
gataaaatcattgattgctacttacgtgatccattgagaaaggaagaagttttcacttat
attcataatatactctctattcctgggtatagcacagaagaaaagcaatctgtatggcaa
aaaactatgaaacacattgaggagctgctgtcagtgagtccttctaaagcagcagatctc
atttctatccacttcagtgaccagatcgagcaaatcattcagaacctgcaggatcagtat
ttacttttccagtttttgaagagtctacttgatccaagggaaggtatcaatcaggacttg
ctgcagctctctccctctattactgaacagtttattaagttactgtgtcagtatgatcca
gaccaggttttagagatcttgcggttcctggagttctacaggctggaagagacaattcag
gttacccagaaataccaactccatgaagcttctgcttatctacttgagaagaaaggagat
attaatggtgcattcttagttatgcttgagtggttacaaagcaagttgttgacgcttaca
cgtgaagatgaaaaatcaatagaatttctttcactgaaggatatagaagacaccttagca
aaaactattgcactttgccagaggaattcacacaatttaaatcaagagcagcgagaggca
ctctggtttccactcctagaagcaatgatgtccccacaaaggtcatcttgttctgcattg
ttgtgccattactctgaatttttgaagaacctgacaatgcaggtgctgaataatatggca
gcattcattgcccttccattgatcttgcagagaattctacaggatccggtctatggaaga
ggaaaacttggagaaattcagggtcttgtactgggcatgctagacagctttaattatgag
caaactcttctggagacaacaactagcctactcaaccatgacctccactggtctttacgt
aatttgaaagcatcagtgactagaggactcaaccccaagcaagactactgttgtatttgt
ctacagcaatacaagagaaggcaagagactgctgatcaaatcatagtcttcagctgtggc
cacctgtatcactccctctgtctgctgagtaaagagtgtggcactgagacaaagggccag
atgaggtggacttgctttaaatgcaatgcaggtaacaaaggagggaaactaagtgtgact
tcctcggaggcaaagaagcgaactccagtatctctggcacaggccagttcagagtcctta
ttggatccacagcaagctcaggcttttgatcagctctgtcgtctgtacagaggaacatcc
aggttagctcttctgacagagctctctcgagataatggtggtgaaaaacatgggctcttc
catgtctcccatggtgatcctgctctgaatagtgtctttcagaacgagaccttccagctt
cacctcactcctcctcctcttctggaagactaa
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integrated database retrieval system
