Hemicordylus capensis (graceful crag lizard): 128352882
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Entry
128352882 CDS
T08891
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128352882 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128352882 (POLR1B)
Enzymes [BR:
hcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128352882 (POLR1B)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128352882 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
128352882
NCBI-ProteinID:
XP_053169403
LinkDB
All DBs
Position
1:complement(432327759..432363177)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDAACRWQSLPDGPSLKHLTAPDYWLPREQQRAALQELTRAHIESFNYAVDEGLHRAVQA
IPPLEFLFKNDQITLAIVGAVINPPMVPKGSICKELKVYPAECRGRRSTYRGKLTVDVSW
AVNGIPKGIIKQSLGNAPIMVKSKLCNLHGLSPKELIKHHEEEEEMGGYFIINGIEKIIR
MVIMPRRNFPLAMIKPKWRSRGPGYTQYGVSIHCVKDEHTAVNMTLHYLESGAVMLNFIH
QKELFFLPLGFVLKALVSFSDFQIFQELVKGKEEDTFYKNCVSQMLRLVTEDGCFTQKQV
LRFLGQRFRVKLNLPEWYTGEQAGEFLSDQCICIHLKTKAEKFYLLCLMTRKLFTLAKEG
CMEDNPDSLMNQEVLTSGQLYLMFLKEKMESWLLSVKIALDKKAQKSHVTISSESMMKIV
GMGTDLTRLLEYLLATGNLRSKTGLGMLQSSGLCVMADKLNFVRYLSHFRCVHRGADFLK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAACEIVTQPSYTISLPPLLCSLGVT
PVDGIPSQPYEECYPVTLDGSLVGWIEKDLAPGLVDTLRHFKAMQEKKLPVWTEVVLIPA
TGKPSLYPGLFVFTTPCRMMRPVQNLALGKEELIGTMEQVFMNIAVSEDEIEPGLTTHQE
LFPHSMLGVVASFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFEYRSDDKLYRLQTPQTP
VVRPSMYDYYGMDDYPIGTNAIVAVISYSGYDMEDAMILSKASWERGFGHGSIYKTERID
LAEKVRQGDDNLVFGLGRDNPDLLENLDADGLPYIGAKLQYGDPYYSYLNLNTGESFVIY
HKNKELCIVDNIKVCSNDTGTGKFKCVCITLRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEEHSALE
YFGRMLQAAGYNYYGTERMYSGVTGVELEADIFIGLVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSLAHVCVKCGSLLSPL
LKPPPVWSATRIRQYVCTLCDRSDTIETIAVPYVFRCFVAELAAINVKVKLSVS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgcgtgccggtggcagagtttgccggatggtcccagccttaagcacttgacg
gcgccggactactggctgcccagagagcagcagagggcggccctgcaagagctgacacgg
gcgcacatcgagtccttcaactatgccgtggacgaaggactgcaccgggccgtgcaggcc
attccacctttggagtttctatttaagaacgaccaaatcactttggccattgtgggggct
gtcatcaacccccctatggtaccgaaggggagcatatgtaaagagttgaaagtctaccca
gcagaatgcaggggacgtcgaagcacctaccgtggaaaactgactgttgatgtcagctgg
gcagtgaatggaatccctaaagggattattaaacaatcccttggaaatgctccaattatg
gtgaagtccaaactttgcaatctccatggcctttctcccaaagaacttataaaacatcat
gaagaagaagaggaaatgggaggttatttcataattaatggtatagaaaaaataatcagg
atggtgatcatgccaaggcgcaacttccctcttgcaatgataaaaccaaagtggagatcc
agaggccctgggtacacacaatacggtgtctccattcactgtgttaaagatgaacacact
gctgttaacatgacccttcattaccttgaaagtggtgcagtaatgctgaacttcattcat
cagaaagagttgttctttctcccactggggtttgtgctgaaggcattagttagtttctca
gacttccagatttttcaggagttggttaaaggcaaagaggaggatacattctataagaac
tgcgtttctcagatgctgagactggtaactgaggacggctgcttcacccagaaacaggtc
ctcagattcctggggcagcgcttccgcgtgaaactgaaccttcccgagtggtatactgga
gaacaagctggagagttcctttctgaccagtgtatctgcatccacctgaaaaccaaagct
gagaagttctacttgctttgtcttatgacccgaaaactgttcactttggctaaagaaggc
tgcatggaggacaacccagacagtttaatgaatcaagaagtgctcacctcaggacaactt
tacctcatgtttttaaaggagaagatggaaagttggttactgtctgttaagatagcctta
gacaaaaaagctcagaagtcacatgtaacaattagttcagaaagcatgatgaagattgtt
ggcatgggaacagatcttacaaggctgctggagtatctccttgccactggcaacctgcgg
tccaaaacaggactgggcatgctgcaaagttccggtctgtgtgtgatggcagacaagctg
aacttcgtgcgctacctctcccatttccgctgcgtgcacagaggtgccgacttcctcaag
atgagaaccactaccgtgcgcaagctgctgccagaatcctggggctttctttgtcctgtg
cacacaccggacggcgagccctgcggcttgatgaaccacttgacggctgcatgtgaaata
gtcacgcagccatcgtacaccatttccctgccgcctttgctctgctctttgggtgtcacg
ccagttgatggcataccaagccagccctacgaagaatgttacccagttactctagatggc
tctctggtgggctggatagagaaggatctagctcctggtcttgtggacactctcaggcat
tttaaggcaatgcaagaaaagaaacttccagtttggacagaagtggtccttattccagca
acaggaaaacctagcctgtacccagggctctttgttttcactaccccttgtaggatgatg
cgtcctgtacaaaacttggcattgggaaaagaagaattgattggcactatggagcaggtc
ttcatgaacattgctgtgtccgaggatgaaattgagcctggactgacgacacatcaggag
ctctttcctcatagcatgttaggtgtagtggcaagcttcattcccttctctgatcataac
cagagtcccagaaacatgtaccagtgtcagatggggaagcaaacgatgggttttccactt
ctaacgtttgagtaccggtcagatgacaaactctaccggcttcagacccctcaaacccca
gtggtgcggccatccatgtatgattattatggcatggacgattatccgattggtacaaat
gcaattgttgctgttatttcctatagtggctatgacatggaagatgcaatgatcttgagc
aaggcctcctgggagagagggtttggacatggaagcatctacaagacagaacgtatcgat
cttgcggaaaaagtcaggcaaggagatgataatctggtatttggacttggtcgtgacaac
ccagatctgttggagaatttggatgctgatggcctgccttacattggagccaaattacaa
tacggggacccttactacagctatctgaatctcaacaccggggagagctttgtgatctac
cacaaaaataaggaactctgtatcgtggataacatcaaagtatgcagtaatgacactgga
acagggaaattcaagtgtgtttgcatcactctgagagtcccccggaacccaaccattgga
gacaaatttgccagccgtcacggacagaaaggcatcttgagcaggttgtggccagccgag
gacatgccatttaccgagagtgggatggtgcccgacatccttttcaaccctcatggcttc
ccatcacgaatgacgattgggatgttgattgagagcatggcgggaaagtctgctgcgctg
catggcctctgtcacgacgccacccctttcaccttttccgaggagcactctgccctggag
tactttggtaggatgctacaggctgcgggctacaattactacggcacagagaggatgtac
agcggggtgacgggggtagagctggaagcagacattttcattggccttgtgtactaccag
cgcctgaggcatatggtctctgacaagttccaggtgaggactacaggggccagagacaaa
gtcaccaaccagcccatcggaggaaggaatgtccagggtggcatccgctttggagagatg
gaacgggatgccctgttggctcatgggacatccttcttgctgcacgaccgtctcttcaac
tgctctgaccgctcactggcccacgtgtgtgtcaagtgtggcagtctgctttctcctctg
ttgaagcctccgcccgtgtggtctgccacccgcatcaggcaatacgtttgtaccctttgc
gatcggagcgacaccatcgaaaccattgctgtaccttacgtcttccggtgttttgtggct
gaattggcagccattaacgtaaaagtgaaactcagtgtgagttag
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