Hahella chejuensis: HCH_00168
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Entry
HCH_00168 CDS
T00307
Name
(GenBank) sigma54-dependent transcription regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hch03000
]
HCH_00168
Transcription factors [BR:
hch03000
]
Prokaryotic type
Other transcription factors
Others
HCH_00168
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
Mg_chelatase
MCM
AAA_5
AAA_16
AAA_22
NACHT
AAA_2
AAA_19
T2SSE
AAA_29
AAA_14
NTPase_1
ATPase_2
AAA_30
ABC_tran
AAA_7
IstB_IS21
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABC27087
UniProt:
Q2SQI7
LinkDB
All DBs
Position
complement(181489..183078)
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AA seq
529 aa
AA seq
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MKNVVIGLLGATMDKRGKGPARWETWRPTVGIFMQQDLLIDRIELLHDARDSRLANNVGA
DIETVSPDTEVSLRQISFSDPWDFEQVYSTLLDFAENYPFKPDEERYLLHITTGTHVAQI
CWFLLCEANYIPAQILQTSPDRGERVAAGKYHLIDLDLSKYDAISSRFKRQQLEGTEFLK
SGIATRNARFNAMIQQIERVAIRSQAPILITGPTGAGKSQLAGKIFELKKIRGSVKGEFV
SINCATLRGDSAMSALFGHNKGAFTGAQTARKGLLAKADQGLLFLDEIGELGLDEQAMLL
HAIEEKRFYPVGSDNPAHSDFQLIAGTNRDLQKQVDNGSFREDLLARINLWSYELPGLKD
RREDIEPNLDYELQKAEQQLGHKVSFNKAARARFLHFAQQPDSLWQGNFRDLNACVQRMA
TLSEGGRINETLVDEECERLQHFWRRSGAHESLPLLEDYLSPGQMAEIDTFDQYQLRSVI
ALCRNSRSLSEAGRQLFNRSRLRKSSSNDSHRLRQYLNKFDLEFDNLKS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtagtcatcggcctgttgggcgccaccatggataaacgcggcaaggggcct
gcgcgctgggagacatggaggccgaccgtcggcatattcatgcaacaggacctgctgatt
gatcgcatcgagctgctgcatgacgccagagactcacgcctggccaataacgtgggcgcg
gatatcgagactgtatcgccggatacagaagtgagcctgcgccaaatcagtttcagcgat
ccctgggatttcgaacaggtttacagcaccctgctggatttcgccgaaaactatcctttc
aagccagatgaagagcgttatctactgcatatcaccaccggcacccatgttgcgcagatt
tgctggttcctgctatgtgaggcgaattatatccccgcgcagattttgcagacttctcca
gaccggggcgagcgcgtcgccgccggcaaatatcacctgatagatctcgacctctccaaa
tacgacgccatcagctcccgcttcaagcgccagcaactggaaggaacggagtttctcaag
tcaggcatcgctacccgtaacgcccgcttcaacgccatgatccagcagatcgagagagtg
gctatacgctctcaggcgccgattctgatcaccggccctacaggagcaggcaaatcccag
ctcgctggcaagatttttgagctgaagaaaatccgcggctccgtgaaaggcgaatttgtg
tcgatcaactgcgccacgctacgtggcgacagcgccatgtcggcgctgttcggtcataac
aagggcgcattcaccggcgcgcaaaccgcacgcaagggcctgctcgccaaggccgatcag
ggactgttgttcctggatgaaatcggtgagctaggcctggatgaacaggcgatgctgctg
cacgccattgaagagaagcgcttctaccccgtcggttccgacaatcctgcgcacagcgac
ttccagcttattgccggcaccaatcgcgacctgcagaagcaggtcgacaacggcagcttt
cgggaggatctgctggcccgcatcaatttgtggagttatgaactgcccgggctgaaagac
cgacgcgaagacatagagcccaatctggactatgagctacaaaaagccgagcagcagtta
ggacataaggtcagcttcaataaagccgcgcgagcgagatttctgcatttcgcccaacaa
ccggactccttatggcagggcaatttccgcgacctgaatgcctgtgtacagcgcatggct
acgctatccgaaggcggccgcatcaacgagacgctggtggatgaagagtgcgaacgcctg
caacatttttggcggcgtagcggcgctcatgagtccctgccgttactggaggattatctg
tccccaggacaaatggcggaaatcgataccttcgaccaatatcaattacgcagcgtgatt
gcgctttgccgtaacagccgctctttgtcagaggcgggacgccagctcttcaatcgctct
cgattgcgtaaaagctccagtaacgactcccaccggctgcggcagtatctgaacaaattc
gacctggagtttgacaatctgaaatcataa
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