Hahella chejuensis: HCH_00224
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Entry
HCH_00224 CDS
T00307
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hch
Hahella chejuensis
Pathway
hch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HCH_00224 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_00224 (recC)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HCH_00224 (recC)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCH_00224 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABC27139
UniProt:
Q2SQD5
LinkDB
All DBs
Position
complement(234699..237920)
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AA seq
1073 aa
AA seq
DB search
MLKIYYSNRQEQLLALLADALARPKANPLQSDILIVQSQGMSRWLSQQLAEINGVAANLE
FQLPAQLIWRLARLCRDDLPELHPFDKSILTWRLMQLAPGLPDSGEFDALHRYLHTGPDR
KSPDLLRNYQLSQRIADVFDHYLMYRPDWLSEWEQGLPTEAGASEHAWQIELWRGLTHDS
DAPHRARVLQELAAQLPQHVDKLPPRLFVFGVPYMAPAYLDVLQNAARHIEVHMYQWNPT
EHYWGDIASRKDISRIRTRDGAEVSGLYDEGHRLLASWGKPLRDYLDVLQDVSVTEADCY
VPPAPPQTLLQRLQADVFNLRQEPWPESPADDRSLQVHLCHSALREVEALYDQLMDLLQT
DHSLSPRDIVVMTPDIEQYAPLVEAVFGAQQGARRIPWSLADLSRYSDFNLVQSVLQLFD
LLPGRFTASEVLGLLEIPAVGRRFGLDEELLSRLRQWLHEASIRWGLDAESQQAYGVDCA
DQFSWKAGIKRLLLGFALPDAMQMYQDVAPYPHIQGGDADSLGALSQLIDTLARWRAQIS
RGQTPQQWADLLHSWMNDLFDPDRDEEQALQVAREAVQEWLQETQTAGFDQPLPLAVVKQ
DLRRRLDSPLRRQSFLTGAVTFCAMVPMRSIPFRVVAVLGLNHDQFPRHQTQPGFDLIAE
YPRKGDRARREEDRFLFLEALLAARDVFYLSYVGRSIRDNSECAPSVILSELLDTIQEQG
GEAAIRRILREHPLQPFSPHYFTADGGHFSYQSEWLPALHGRHSKQEYQAFCPESLPPRE
REPFSTDHPVELDSLRRFLRNPTRYFVQQRLNILLDASDLAQDREPFDLAGLHGFQVKEL
WLQELMNAATDEEAESYLEAKGLLPGGAVGAISRKQTRQQLEALREQARELYGKDRIEIT
PEKSGLPLRGAVAGIGPRGLLHLTTAGCSASRMLLLWLEHLALCGVTADALARPSFLVCR
QGVGHYRPVAQNQARQLLAELMDLLTQSENEPVRFFPKTSLKYVETKNNPRSRSEPINAA
LNCWLGNEWQPGELADAHHFLVWRFEAETLNERFVALAESIWEPALEHWEAPA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatctactacagcaaccgtcaggaacagctgctcgccttgctcgccgacgcc
ctcgcgcgccccaaagccaacccattgcaaagcgacatactgatcgtacaaagccagggt
atgagccgttggctgagccagcaactggcggagatcaacggcgtcgccgccaatctggag
tttcaactgccggcgcagctgatctggcggctggcgcgactgtgtcgggatgatttgcct
gaactgcatccttttgacaaatccatcctgacctggcgtctcatgcaactggcgcctggg
cttcctgacagcggcgaattcgacgccctgcatcgctatctgcacacaggcccggatcgc
aaatcgccggacctgttgcgcaactatcagctgagccaacgcatcgccgatgtcttcgat
cactatttaatgtatcgcccggactggctatcagagtgggagcaaggtctgccaaccgaa
gccggcgccagcgagcacgcctggcagattgagctctggcgcggcctgacccacgacagc
gacgcgccgcaccgggcccgcgtactgcaggagttggccgcgcagctgccgcagcatgtg
gataaactgccgccgcgtttgttcgtctttggcgttccctatatggcgccggcgtacctg
gatgtgctgcagaacgccgcccgccatatagaagtgcacatgtatcaatggaaccctacg
gagcattactggggcgacatcgcctcccgtaaggacatcagccgcatccgcacccgcgat
ggcgcggaagtctctggcctgtacgacgagggccaccgactgctggcgtcctggggcaaa
ccgctgcgggattacctggacgtgctgcaggacgtgtccgtcacggaagccgactgctac
gtcccgcccgcgccgccgcaaaccttgctgcaacgcctgcaggcggacgttttcaacctg
cgtcaggagccatggcctgagagccccgctgacgaccgctcgctgcaggtgcatctgtgc
catagcgccttgcgcgaagtagaagcgctgtacgatcaactgatggatctgctgcaaacc
gatcacagcctgtctccccgggatatcgtggtgatgacgccggatatcgagcagtacgcg
cctcttgtcgaggcggtattcggcgcccagcaaggggcgcgccggattccctggtccctc
gccgacctgagccgttacagcgacttcaatctggtgcagtcggtattgcaactgttcgat
ttgctgcccggccgttttaccgcgtccgaggtgctgggcctgctggaaattcccgctgtg
ggacgacgtttcggcctggatgaagagctgttatcccgtctgcgccagtggctgcatgaa
gcctccattcgctggggcctggatgcggaatcgcaacaggcctatggcgtcgactgcgcc
gatcaattcagctggaaggcggggatcaaacgtctgctgctgggcttcgccctgcccgat
gcgatgcagatgtatcaggacgtggctccttatcctcatattcagggcggcgatgcggac
agcctgggcgcgctatcgcaactgatcgacaccctggcgcgctggcgcgcgcagatctcc
cgcggccagacgccccagcaatgggcggacctcttacacagctggatgaacgatctgttc
gatcctgaccgggacgaagagcaggcgctgcaggtcgcccgcgaggcggtgcaggaatgg
ctgcaggagacccagacagcgggcttcgatcagcccttgccgctggcggtggtgaaacag
gatctgcgccgacgtctggacagcccgttacggcgtcagagtttccttaccggggcggtc
accttctgcgccatggtgcccatgcgcagcattccctttcgcgtggtcgccgtcctggga
ttgaatcatgaccagttcccgcgccaccagacgcagccgggtttcgacctgatcgccgag
taccctcgtaaaggcgatcgcgcccgccgcgaggaagaccgttttctgtttctggaggcc
ttactggccgcccgcgacgtgttttatctgagctatgtgggacgcagcatccgcgacaac
agcgagtgcgcgccatcggtcattctcagcgagctactggatacgattcaggagcagggc
ggcgaagcagcgatacggcgcattctcagggagcacccgctacaacctttcagtccgcat
tattttaccgccgacggcggccacttcagctatcagtcggaatggttgcccgccctgcac
ggtcgacacagcaagcaggaatatcaggcgttctgcccagagtccttaccgccccgggag
cgggagccgttttccaccgaccatccggtcgagttggacagtctgcggcgttttctccgc
aacccgacccgttactttgtgcagcaacggctcaatatattgctggacgccagcgatctc
gcgcaggaccgggagcctttcgatctggccggcctgcacggcttccaggtaaaagaactg
tggctgcaggaactgatgaacgcagcgacggatgaagaggcggaaagctacctggaagcc
aaagggttgctgcccggcggcgccgtcggcgccatcagccgcaagcaaacgcgacagcaa
ctggaagccctgcgcgagcaagcccgtgagctgtatggcaaggatcgtatcgaaattacc
ccggaaaaatccgggctgccattgcgcggcgcggtggcgggcatcggcccgcgcggcctg
ctgcacctgaccaccgctggctgcagcgcttcccgcatgttgttgctgtggctggagcat
ctggcgttatgcggcgtcaccgccgacgccctggcccgccccagtttcctggtgtgccgc
caaggcgttggccattaccgcccagtggctcaaaaccaggccagacaattactggcggag
ctaatggatctgctgacgcaaagtgagaatgaaccggtgcgtttcttccccaaaacatcg
ttgaagtatgtggaaaccaaaaataatccacgtagccgcagcgaacccatcaacgccgct
ctgaactgctggctgggtaacgagtggcagccgggtgaactggcggatgcgcatcacttt
ctggtgtggcgttttgaagcggaaactttgaacgaacgcttcgtggcgctggcggaaagc
atctgggagcctgcgctggagcattgggaggcgccggcatga
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