Hahella chejuensis: HCH_00743
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Entry
HCH_00743 CDS
T00307
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hch
Hahella chejuensis
Pathway
hch03420
Nucleotide excision repair
hch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCH_00743
03430 Mismatch repair
HCH_00743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_00743
Enzymes [BR:
hch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCH_00743
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCH_00743
MMR (mismatch excision repair)
Other MMR factors
HCH_00743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_12
Viral_helicase1
DUF7117
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABC27641
UniProt:
Q2SNY3
LinkDB
All DBs
Position
735065..737230
Genome browser
AA seq
721 aa
AA seq
DB search
MDVTAVLDPLNDAQREAVTASARNLLVLAGAGSGKTRVLVHRMAWLIQVERIGAHAIMAV
TFTNKAAREMRERVESLLHIPTRGMWLGTFHSLAHRLLRAHWREAGLPENFQVIDSDDQQ
RMLKRVIRELGLDESKWPARQAQYFINSQKDEGLRPDNIEPGSDAWRQTMNKIYQRYDEY
CRQSGLVDFGELLLRSHELWLQKPDLLRHYQQRFQHILVDEFQDTNTIQYAWLRVLAGDR
VPMTVVGDDDQSIYGWRGAKIENIQRFQNDFGEAALVRLEQNYRSTQTILRAANHVIAHN
PSRLGKQLWTDQGEGEAIDVYAAFNEQDEANYIVESVQSWVNQGRSRSEVALLYRSNVQS
RVLEEALIRHGVPYRIYGGLRFYDRLEVKNAVAYLRLAHFADDDAAFERVVNIPSRGVGA
KSLETLRDAARERRGSLWRTSVAAVSAGLIKGKAGAGLKHFIEIVENLREFAKENSLQDL
TKHMLEVSGILEHHANEKGDKAEARKENLLELVNAVAEYETLDNESPLAEFLTQAALDAG
ERQAEVDQDAVQLMTLHSAKGLEFPLVFLTGMEEELFPHSMALEEAGRLEEERRLCYVGI
TRAMEKLVLTFAESRRLYGQDKYHSISRFVREIPNELLREVRLRSVVSKPMFWDRGPAHG
AIGESAQQSGISLGQRVRHEKFGEGVVLNYEGSGPHSRIQVNFDDQGSKWLVLSYAKLEA
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaacggcggttttggacccgcttaacgatgctcaacgtgaggcggttaccgcc
agcgctcgcaacctgctggtgctggccggcgccggcagcggcaaaacccgcgttcttgtg
caccgcatggcatggttgattcaagtcgagcgtattggcgctcacgcaataatggcggtg
acgttcaccaacaaggcggcgcgggaaatgcgtgagcgggtggagtcgctgttgcatata
ccgacgcgtggaatgtggctgggaacctttcacagcctggcgcacagactgctgcgcgcg
cactggcgagaagccggtttgccggaaaacttccaggtgatcgactcagatgaccagcag
cgcatgctgaagcgagtgattcgcgaattgggactggatgagtccaagtggcctgcgcgc
caggcgcagtattttatcaacagccagaaagacgaagggctgcgaccggataatattgaa
ccgggtagcgacgcctggcggcagaccatgaacaagatataccagcgctacgacgaatat
tgtcggcagagcgggttggtggactttggcgagttattgctgcgctctcatgaactctgg
ctgcaaaagccggatctgttgcggcactatcagcagcgcttccagcatattctggttgac
gagtttcaggataccaacaccattcaatatgcgtggctgcgcgtgttggcgggggaccgc
gttcccatgaccgtggtcggagacgacgaccagtccatctacggctggcgcggcgccaag
attgagaatattcagcgtttccagaatgacttcggcgaagcggcgctggtgcgccttgag
cagaactaccggtcaacgcagaccattctgcgggccgccaaccacgtcattgcccacaac
cccagtcgtctgggcaaacagctatggacggatcagggcgaaggcgaagcgattgacgtg
tacgctgcgtttaacgagcaggatgaagccaactatattgtcgaatccgtgcagtcatgg
gtgaatcaggggcggtcgcgttcggaagtggcgctgttgtaccggtccaacgtgcagtcg
cgggtattggaagaagcgttgatccgccacggcgtgccatatcggatatatggcggttta
cgcttctatgatcgtctggaggttaaaaacgcagtggcgtatttgcgcctggcccatttc
gcggatgatgacgccgcctttgagcgggtggtcaacattccgtctcgcggcgttggcgcc
aagtcgttggaaaccttgcgcgacgcagcgcgcgagcgcagagggtcgttatggcggact
tctgtggcggcggtcagcgcaggcttaatcaaaggcaaagcgggagctgggctgaagcat
tttattgaaatagtcgaaaatctgcgcgaatttgcgaaagagaacagtttgcaggatctc
accaagcatatgctggaagtcagcggcatattggagcatcacgccaatgaaaagggagat
aaggcggaagcgcgcaaggaaaacctgctggaactggtgaatgcggttgccgagtacgaa
acactcgacaatgaatcgcccttggcggagttcctgacccaggcggcgctggacgcaggc
gagcgtcaggcggaggtggatcaggatgcggtgcaactgatgacattgcactccgccaaa
ggtttggagtttcccctggtgtttctgacaggcatggaggaagagctgtttcctcattcg
atggctttggaagaggcgggacgtttggaggaagaacgccggttgtgctacgtcggcatt
actcgcgccatggagaagttggtgcttacttttgcagaaagtcgccgtttgtatggccag
gataaatatcactccatttctcgttttgtccgcgaaatccccaatgagctattgcgtgaa
gtgcgcttacgctccgtcgtgagcaaacctatgttttgggatcgtgggcctgcgcatggc
gcgattggcgagtctgcgcaacagtcaggtatttctcttgggcagcgggtgcgacatgaa
aagtttggtgaaggcgttgtgctgaactatgaaggcagtggtccgcattcccggattcag
gtgaacttcgacgatcagggcagtaagtggctggtgctttcatacgccaaactggaagcg
atttga
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