Hahella chejuensis: HCH_00897
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Entry
HCH_00897 CDS
T00307
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_00897 (sbcD)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCH_00897 (sbcD)
Archaeal homologous recombinant proteins
HCH_00897 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ABC27788
UniProt:
Q2SNI6
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All DBs
Position
895774..897090
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AA seq
438 aa
AA seq
DB search
MTFRILHTSDWHLGQHFFGKTRADEHAMFFNWLLEQVQVHEVDALIVAGDIFDTGAPPSY
ARELYNRFVVELQRTDCQLVLLAGNHDSVATLNESKDLLACLNVHVVAGMPGTPENNVLL
LNDRNEEPGAILCAVPFLRQRDLTTSKAGQDGAEKQQALQQAIADYYARLFQLAQARREE
FGEALPIIATGHLTTVGAELTESVRDIYIGALDAFPSGAFPPVDYIALGHIHRSQKVGGQ
EHIRYSGSPIPLSFDEAEQSKSVLMVDFEDGRLQQVTPLETPCFQPMQVIRGDLKSIEKQ
LGSIVAPNSQLSLFSNADKVWVDIEVAATQDYLDDLQRRIQDMVGALPVEVLLVRRERKN
KGLRLERLEKETLAELTVEEVFERRLAQEVWEGEEAEARRQRLLGMFRQVENDVLGDGLE
ADAEAEPHVETSVTGGDV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcgtattcttcatacctcggactggcaccttggccagcactttttcggtaaa
acccgggcggacgagcacgccatgtttttcaactggctgttggagcaagtccaggtgcat
gaggtggatgctttaatcgtcgctggcgatattttcgacaccggagcgccgcccagttat
gcgagggagttgtacaaccgctttgtcgtggagttgcagcgcactgactgtcagctggtg
ctgctggcgggtaatcatgattccgtcgccacgttgaatgagtccaaagatctgttggcc
tgcctgaacgtgcatgtcgtcgccggtatgcctggtacgccagaaaataatgtgctgctg
ttgaatgaccgcaatgaggagccgggggcgattctgtgtgcggttccttttttgcggcaa
agggatcttaccaccagcaaggccgggcaggatggggcggagaaacagcaggcattgcag
caggcgatcgctgactactatgcgcgtctgtttcagttggcgcaggcgcgccgcgaggaa
ttcggcgaagcattgcccatcatcgccaccggtcatttgacgacggtgggagcggaactt
acggaatcggtgcgggatatttatattggcgctctggacgcatttccttctggcgccttt
cctccagtggactacatcgctttaggccatattcatcgctcacagaaggtgggcggtcag
gaacatattcgttacagcggttcgccgattcctctgagttttgatgaagcggagcagtcc
aaatcagtattaatggtggatttcgaagatgggcgcctgcaacaggtgacgcccctggag
actccctgctttcagcctatgcaggtgatacgcggagatctgaaatccatagagaaacag
ctgggttccattgttgcgcccaattcacaactgtcgctattcagcaatgcggataaagtc
tgggtcgatattgaggtggcggcgacccaagactaccttgatgatttgcagcgccgcatc
caggacatggtcggcgctctgccagtggaagtgcttttggtgcgtcgcgaacgtaagaac
aaggggcttaggctggaacggctggagaaagaaacattggcggagttgacggtggaagaa
gtttttgagcgccgtctcgctcaggaagtctgggagggagaggaggcggaggcgcggcga
caacgtctattaggcatgttccgccaggtggagaatgatgtgcttggggacggtttggag
gcggatgctgaagctgaaccccatgtcgaaacgtctgtgacggggggcgatgtatga
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