Hahella chejuensis: HCH_01241
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Entry
HCH_01241 CDS
T00307
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hch03016
]
HCH_01241 (truB)
Enzymes [BR:
hch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HCH_01241 (truB)
Transfer RNA biogenesis [BR:
hch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HCH_01241 (truB)
Prokaryotic type
HCH_01241 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABC28113
UniProt:
Q2SML1
LinkDB
All DBs
Position
1254714..1255649
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AA seq
311 aa
AA seq
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MARRKKGAPLNGVMVVDKPQDWTSNAVLQKVKYALNAQKAGHTGALDPLATGVLPLCFGE
ATKFSQLLLDSDKEYVTCAYLGRTTTTSDADGDIIAESPVPGLSVSDLESVLGKFRGNLK
QIPSMYSALKHKGTPLYKLARQGIEVEREARDIIIHELELLDYTPPFLRLRVLCSKGTYI
RNLVEDIGQVLGCGAHVMELRRTRCGPFSLADSVEFVSFADESGRQAAAEKYKERLLPID
SSVQQFSEIILDEANTGSIIQGQTVKISPLSSEGKVRLYTNRRHFIGLGEVMSDGTVKPV
RLLNVSALSAE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagacgtaagaaaggtgcgcctttaaatggagtaatggtcgttgataagccgcaa
gattggacgtccaatgctgtattgcaaaaggttaagtacgcgctgaacgcgcagaaagcg
ggtcatacgggcgctttggatcctctagcgacaggggttttacccttgtgctttggtgaa
gctacaaagtttagccaattgctgttggactctgataaagagtatgttacgtgcgcctat
cttggccgtactacaaccacttctgatgctgatggcgatatcatagcggagtcgcctgtt
cctggcctctctgtttctgatctggaaagtgtccttgggaaatttagggggaatctaaag
cagattccctcaatgtattcagctttaaagcataaaggcactcccctttacaagcttgcc
cggcaggggatagaggtagagagggaagccagggatatcatcattcatgagcttgagctc
ctagactacactcctccttttttgcgtttacgggttctctgcagtaagggaacctatatt
cgtaacctagtggaggatatcggtcaggttttaggttgtggagcgcatgtaatggaattg
cgtcgtacacgttgcggaccattttcgctggcggatagcgttgagtttgtttcatttgct
gatgaaagcggacgccaagccgcggcggagaagtataaagaacgtttgctgcccatagat
tcgtctgtccaacagttctccgaaataattttggacgaggctaatacaggctcgattatc
caggggcaaacggttaaaatatcgcctctctcaagcgaggggaaggttcgtctgtatact
aacaggcgtcattttatcggcttgggagaagtgatgagcgatggaacggttaagcccgtt
cggttgctcaatgtgagcgcgcttagcgctgaatga
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