Hahella chejuensis: HCH_01373
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Entry
HCH_01373 CDS
T00307
Name
(GenBank) sigma 54-dependent transcriptional activator containing GAF domain
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hch03000
]
HCH_01373
Transcription factors [BR:
hch03000
]
Prokaryotic type
Helix-turn-helix
Other families
HCH_01373
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
Mg_chelatase
AAA
HTH_8
AAA_2
GAF_3
AAA_22
MCM
AAA_16
DUF2046
Motif
Other DBs
NCBI-ProteinID:
ABC28236
UniProt:
Q2SM88
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All DBs
Position
1379957..1381552
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AA seq
531 aa
AA seq
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MTDAPLSVLVEIAVDLANSLTNEDRFDRLLSAVRRAIPCDAVALLALREDMLVPLAAQGL
SPDILGRRFKADEHPRFERLTQSRQPVRFAADCQLPDPYDGLLLATEGDLPVHACMGFPL
YSDNRLIGLLTLDSLSAGVFDDISQKTLSILNALAAATLRSAELLNMLEYKASHAHEVAL
ALTQEALSRDGGELIGESAAMAQLKREIRLVASSDFNVLVTGETGVGKELVARTLHMLSS
RCNEPLVYVNCAAVPDALAESELFGHVRGAFTGANSDRMGKFMLADGGSLFLDEIGELSL
AVQSKLLRALQSGEVQKVGRDKPEKVNVRVIAATNRDLAREVKAETFRADLYHRLSVYPI
QVPPLRERDQDVLLLAGYFIAATRRKLGMEQIRLAPAVNEALLAYPWPGNVRELEHTISR
AALRARSEQAGKRIVTILPEHCDLSVPPSSSTILQPDRTVSAELASSHKPVNLKEETERF
QRELIHRTLTEAQGNWAAAARALSLDRANLIRLAKRLGVHVERRHAVVRKQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgcccctctccgtgctagtggagatcgctgtggatctcgccaatagtctg
accaatgaagaccgttttgatcgcttattgagcgccgtgcgcagagccataccctgcgat
gcggtggcgctgctcgccttgcgcgaggatatgttggttccactggcggcgcaggggttg
tcgccggatattctggggcgtcgtttcaaggcggacgaacacccgcgtttcgagcggctg
acgcagtcgcgacaacctgtgcgcttcgccgccgactgccagctgccggacccatacgac
ggcttgctgctggcgacggagggcgatctccccgtccatgcctgcatgggcttccctttg
tattctgacaatcgcttgatcggcctgctgacactggacagtctcagcgcgggggtgttc
gacgatatttcccagaagacgctgtctattctcaatgctctggccgctgcgacattacga
tccgctgaactgctgaacatgctggagtacaaggccagtcacgcccatgaggtggcgttg
gcgttgacccaggaggcgctgagccgcgacggcggcgagctgataggcgaaagcgcagcc
atggcgcagttgaagcgggaaatccgtctggtggcgtcctcggattttaatgtgctggtg
accggggagacgggcgtggggaaagaactggtcgcccgtactctgcacatgctgtcgtcc
cgctgcaatgagcccctggtttacgttaactgcgccgccgtacccgacgctctggcggaa
agcgagctgtttggacatgtgcggggcgctttcaccggcgccaacagtgatcgtatgggc
aagttcatgctggcggatgggggctccctgtttctcgatgaaatcggcgagttgtccctg
gctgtgcagagcaaactgttgcgggcgctgcaaagcggagaagtgcagaaagtagggcgg
gacaaaccggagaaagtgaacgtgcgggtgatcgcagccaccaaccgggatcttgcgcgg
gaagtgaaagcggaaacgtttcgcgcggatttatatcaccgtctgagcgtctaccccatt
caggttccgcccttgcgcgagcgcgaccaggacgtcttgttgctggcgggctattttatc
gctgcgacgcgacgcaagctgggtatggagcagattcgattggccccggcggtgaacgag
gcgttgctggcttatccctggccggggaatgtgcgagagctggagcacaccatcagtcgg
gcggcgctgcgcgccagaagtgaacaagccggtaagcggatcgtgacgatcctgccggag
cactgtgacctttctgttccaccttcctcttccacgatattgcagcctgaccgcacagtt
tccgccgagctggcttcatcgcataagcctgttaacctgaaagaagaaacggaacggttt
cagcgtgagctgattcatcgcacactcaccgaagcgcagggcaattgggccgccgccgcc
cgtgctctgtctttggaccgcgctaacctgatcaggctggccaagcgattaggcgttcat
gtggaaaggcggcatgctgtcgtgcgcaagcaatag
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