Hahella chejuensis: HCH_01412
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Entry
HCH_01412 CDS
T00307
Symbol
csdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
hch
Hahella chejuensis
Pathway
hch00450
Selenocompound metabolism
hch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HCH_01412 (csdB)
Enzymes [BR:
hch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
HCH_01412 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
HCH_01412 (csdB)
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABC28274
UniProt:
Q2SM50
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All DBs
Position
complement(1417384..1418622)
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AA seq
412 aa
AA seq
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MTQAIKRPFDVMSVREDFPILQQQVNGKPLVYMDNAATAQKPLAVIEAMNTYYREFNANV
HRGAHSLSDRATGEFEAARDKVRAFVNAPSREEIIWVRGVTEAINLVAQSYARSTLQPGD
EIIVSQLEHHANIVPWQIVAQQTGAQIRVIPITPDAELDMAAYQALLNEKTRIVAVNHAS
NAMGTVNPVKEMIRLAKSVGAVTLIDGAQGAPHLEIDVQDLDCDFYAISAHKAFGPTGIG
ALYGRKALLEAMPPYQSGGEMIERVSFSGTTFNVPPFKFEAGTPAIAEAIGFAAALDYLS
QFDKAQLKAHEDSLLQLAAELAPSVPGLRPVGTAKDKVSVFSFLVDGLHPSDLGTLLDQQ
GIAVRTGHHCAQPLMECLGVPGTTRASFAFYNTREEVEKLFAALQKITRLFI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcgattaaacgtccctttgatgttatgtccgtccgcgaggacttccctatc
ctgcagcagcaggtgaacggcaaacctctggtatacatggataacgccgctaccgcgcaa
aagccgctggcggttatcgaggccatgaacacgtattatcgggagtttaacgccaacgtg
catcgcggcgctcacagcctgagcgaccgcgccacaggtgagtttgaagccgcccgagac
aaagtgcgcgccttcgtcaacgcgccgtctcgtgaagagattatttgggtgcgcggcgtc
actgaggccatcaacctggtggcgcaatcctacgcccgcagcactctgcagcccggcgac
gagattattgtcagccagcttgagcatcacgccaacatcgtgccctggcagattgtggcg
caacagaccggcgcgcagataagagtcattccgattacgcctgacgccgaactggacatg
gccgcctatcaggcgctgctgaacgaaaaaacccgcatcgtggcggtgaaccatgcgtcc
aatgcaatgggcacggtgaatcccgtcaaggaaatgattcgtttggctaagagcgtcggc
gcggtgacgttgatagacggcgcccaaggcgcgccgcatctggaaatagacgtgcaggac
ctggattgcgatttctatgcgatctccgcccacaaggcgtttggccctaccggcatcggc
gcgttatacggccgcaaagcgttgctggaagccatgcccccatatcagagcggcggcgaa
atgattgagcgcgtgtccttttccggcactacgttcaacgtgcctccatttaagtttgaa
gccggcacgccagccattgcagaagccatcggtttcgcagcggcgctggactatctgagt
caattcgacaaagcgcaactgaaagcccatgaagacagcctgctgcaacttgcggcggag
ctggcgccgtccgtccccggcttgcgtccggtgggtacggcgaaagacaaagtttccgtt
ttttcctttttggtggacggcctgcatcccagcgacctgggcaccttgctggaccagcaa
ggcatcgcggttcgcaccgggcaccattgcgcgcaaccattaatggagtgcctgggcgtt
cccggcaccacccgagcctctttcgcgttctataacactcgcgaagaggttgaaaaactg
ttcgccgccctacagaagataaccagactgtttatttag
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