Hahella chejuensis: HCH_01781
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Entry
HCH_01781 CDS
T00307
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hch
Hahella chejuensis
Pathway
hch03410
Base excision repair
hch03430
Mismatch repair
hch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCH_01781 (recJ)
03430 Mismatch repair
HCH_01781 (recJ)
03440 Homologous recombination
HCH_01781 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_01781 (recJ)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HCH_01781 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCH_01781 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HCH_01781 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ABC28625
UniProt:
Q2SL49
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All DBs
Position
1805663..1807321
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AA seq
552 aa
AA seq
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MQRIYAARGVVSGDELEYSLSHLLQLDSLAGAQSAAVILAEALQRNQRIIFVGDFDADGA
TSTALGVLALRMFGAAYVDYIVPNRFEFGYGLSPEIVDVALSRKPDVLITVDNGIASIDG
VKAAKRAGLQVIVTDHHLAGAELPEADAIVNPNQPGCDFPSKSIAGVGVIFYVMLALRQT
LRDKGWFAATGMIEPNLANLLDLVALGTVADVVSLDANNRILVEQGLRRIRVKRCRPGIN
ALLQVAGRNQEKLGASDLGFSIAPRLNAAGRLEDMTVGIELLLTEDPAKALMIAQELDGL
NQARKEIERDMQAQALSILDRMNWTYDNPPAAVCLYDESWHQGVVGILASRIKDRLHRPV
IAFAPGDNGELKGSARSIPGLHIRDALDAVATRRSGLLSKFGGHAMAAGLSLRPENFTAF
SEAFQEVVAAAVSVDDLQAKLLTDGELSPEELCMNMAIALKNAGPWGQSFPEPLFDGQFR
IASCRIVGERHLKMALADSRSGNCYDAICFNIDPATPFSEWDRVKVVFRLDINEFRGHSN
LQLLIEYLEPCN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcggatctatgccgccagaggcgtcgtcagtggcgacgagctggagtattcatta
agtcatttgctgcaactggatagtctggctggagcgcaaagcgccgcggttattctggcg
gaagcattgcagcgtaatcagcgcattatttttgtgggcgactttgacgctgacggcgcc
accagcacggcattgggcgttctggcgttgcgtatgttcggcgccgcctacgtggactac
attgttcccaaccggtttgaattcggctatggcctttctcctgagattgtggacgttgcg
ttgtctcgcaagcctgatgtgctgattacggtggataatggcatcgccagcattgatggc
gttaaggccgccaagcgggcggggctgcaagtcattgttaccgaccatcacttggccggc
gcggagttgccggaagctgatgcgattgtgaatcccaatcaacctggttgcgactttccc
agtaagtctatcgcaggggtgggggttattttctatgtgatgttggcgttgcggcagacg
ctgcgcgacaaggggtggttcgccgctaccggcatgatagagccaaatctggctaatttg
ttggatttggtggcgctggggaccgtcgccgatgtggtctcgctggacgctaataaccgg
atactggtagagcaggggcttcgacgtatccgcgtcaagcgctgtcgtcccggcattaat
gcgctactgcaggtggcggggcgtaatcaggaaaaactgggcgcttctgatctgggattt
tctatcgccccaaggcttaatgcggcgggacgtctggaagatatgactgtggggattgag
ctgttgctgacggaagatcccgccaaggctttgatgattgctcaagagcttgatggatta
aatcaggcgcgcaaagaaattgaacgtgatatgcaagcccaggcgctgtctattctggat
cgcatgaactggacttacgacaacccgccggcggctgtttgtctttatgatgaaagctgg
catcagggggtagtggggattcttgcatcacgcattaaggaccgtctgcaccgccctgtc
attgcttttgcgccaggggataatggcgaactgaaaggctcggcccgatcaataccaggt
ttgcacattcgcgatgcgttggatgcggtcgccaccaggcgcagcgggctgttgtccaag
ttcggcggtcacgccatggcggcgggattatctctgcgaccagaaaatttcactgctttt
tcggaagcgtttcaagaggttgttgcggctgctgtgagtgtagacgacctgcaggccaaa
cttttgacggatggcgagctgtctcccgaagagctttgcatgaatatggcgatcgccttg
aaaaatgcgggcccatgggggcaatccttcccagaaccgttgttcgacggccagttccgt
atcgccagttgtcgaattgtcggtgagcgccatctcaagatggcgctggcggatagccgg
tccggaaattgctacgacgctatctgcttcaatatcgatcccgcgacgccgtttagtgaa
tgggatcgggtaaaggtggttttcaggctcgacataaatgagtttcgcggacatagcaat
ctgcaattgcttatcgagtaccttgagccttgtaattag
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