Hahella chejuensis: HCH_01800
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Entry
HCH_01800 CDS
T00307
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hch
Hahella chejuensis
Pathway
hch03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HCH_01800 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hch03019
]
HCH_01800 (rnc)
03009 Ribosome biogenesis [BR:
hch03009
]
HCH_01800 (rnc)
03036 Chromosome and associated proteins [BR:
hch03036
]
HCH_01800 (rnc)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HCH_01800 (rnc)
Messenger RNA biogenesis [BR:
hch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HCH_01800 (rnc)
Ribosome biogenesis [BR:
hch03009
]
Eukaryotic type
90S particles
RNase
HCH_01800 (rnc)
Prokaryotic type
rRNA processing factors
HCH_01800 (rnc)
Chromosome and associated proteins [BR:
hch03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HCH_01800 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
DUF1249
MORN_DRC7
Motif
Other DBs
NCBI-ProteinID:
ABC28642
UniProt:
Q2SL32
LinkDB
All DBs
Position
1823276..1823956
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AA seq
226 aa
AA seq
DB search
MTAKLERLQRALGYTFKEPALLTLALTHRSFGGRNNERLEFLGDSVLNFIIADYLFGRFE
EAREGQLSRLRARMVKGVTLAEIAREFDLGEYLRLGSGEMKSGGFRRESILADALESIIG
AIYLDAGFEVCADRVLNWFEARLQKLNLKDTQKDSKTRLQEYLQARQLNLPRYEVISVQG
EAHAQTFHVRCEIDGLSDATEGTGSSRRVAEQKAAKQALLALGVDQ
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgacagctaagctggaaagactgcagcgggcgctcggatatacatttaaagagcccgct
ttgcttactttggcgcttacccaccgcagcttcggtggtcgtaataatgagcgcttggaa
tttttaggggactctgtcctcaactttattattgccgactacctctttggccgttttgaa
gaagctcgggaagggcagttgagccgtctgcgcgcgcgaatggtcaaaggggtgactctg
gcggaaatagccagagaatttgatctcggcgaatatctgcgattggggtcaggagagatg
aagagcggcggttttcgtcgggaatctatcctggccgatgcgctggagtctattattggg
gctatttatctggatgctggctttgaagtctgcgccgatagagtgttgaactggtttgaa
gcgcgtttgcagaagcttaatctaaaggatactcagaaagactccaagacacgtttgcag
gaatatctgcaggcgcgtcagcttaatctgcctcgctacgaagttatttcagtgcagggg
gaagctcatgctcaaactttccatgtgcgttgtgaaatagacggcctgtctgacgcaacg
gaagggaccggaagcagccggagagtggcggagcagaaagcggcgaaacaagccttgttg
gcgttaggagtggatcagtga
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