Hahella chejuensis: HCH_01806
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Entry
HCH_01806 CDS
T00307
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hch03009
]
HCH_01806 (rumA)
Enzymes [BR:
hch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HCH_01806 (rumA)
Ribosome biogenesis [BR:
hch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HCH_01806 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
PCMT
Methyltransf_11
TRAM
Methyltr_RsmB-F
MTS
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_23
RrnaAD
Methyltrans_SAM
DREV
CMAS
PrmA
Motif
Other DBs
NCBI-ProteinID:
ABC28647
UniProt:
Q2SL27
LinkDB
All DBs
Position
1829821..1831161
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AA seq
446 aa
AA seq
DB search
MSRRRKKLPQESITCEIESLSHEGRGVSHKDGKTLFVEGALPGETVTARYVNSRRSYDEL
AVEEVLTQHPQRIEPDCQFSKLCGGCSMQHVDLGFQINHKESVLLDHLRHFGDLKPEQVV
PPLVGAGRGYRTKARLGVRYVAKRDEVLVGFRERYSNFLTAIDECPILIESVGGRIPELK
ALVRSLSGYQRIPQIEVAAGDDMCALVIRHMDPLTEEDLQKLIAFSEQTGLAIYLQPKGP
DTVAKLWPKDGQELLSYQLRDYGLTMQFHPMDFTQVNRDINRRMLAQALEWLQPQAGETI
LDLFCGLGNFTLPIARSAAHVVGVEGSEDMVRRGYANAELNGISNVEFHAADLHLPLAPA
KEAKHAWLRTYDKVLLDPPRSGAEELAKQMTRFGAKRIVYVSCNPATLARDAGILATQGY
KLIKAGVMDMFPHTAHVESMALFEKA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgtagaaagaagttaccccaagagtccattacctgcgaaatcgaatctctc
agtcacgaagggcgtggcgtctctcataaagatggcaaaaccctgtttgtcgaaggcgca
ttgcctggcgaaactgtgactgcgcgatatgtaaacagtcgtcgcagctatgatgagctt
gctgtagaagaggtgctgacgcagcatccgcaacgcattgagcctgactgtcaattctcc
aaactgtgcggtggctgcagcatgcagcatgttgatctgggctttcagatcaaccacaaa
gagtctgtgttactggaccacctacgccattttggcgacttaaagccggaacaggttgtt
ccgcctctggtgggcgcggggcgcggttatcgcacaaaagcgagactgggcgtgcgttat
gtcgccaagcgtgatgaagttcttgtcggcttccgcgagcgctacagtaacttcctgacc
gccattgatgaatgcccgatattgatcgagtctgtcgggggccgtattcctgaactgaaa
gcgctggttcgaagcctctccggctatcaacgtattcctcagatcgaagtggcggcgggc
gacgatatgtgcgctttggtgatccgtcatatggacccgctcactgaagaagatttgcaa
aaactgatcgctttctccgaacaaactggattggcaatctatttgcagccaaaaggtccc
gataccgtcgccaaattgtggccgaaagatggccaggaactgctcagctaccaattgcgc
gactatggtttgacgatgcagttccatccgatggactttacccaggtcaatcgcgatatc
aaccgtcgtatgttggcgcaggcgctggaatggttgcagccgcaggccggagagaccatc
ctcgacctgttttgcggactgggtaatttcaccctgcccatcgcccgttcggctgcgcat
gttgtgggcgtggagggcagtgaggatatggtgcgtcgaggatacgccaacgcggagctt
aatgggatcagtaacgtagagtttcacgctgcggacctgcatcttccgttagccccagcg
aaagaagcgaaacatgcatggctgcgaacctatgacaaagttctgctggacccgccacgc
tctggcgcggaagagttagcgaaacaaatgacccgttttggggcgaagcgaattgtttat
gtgtcctgtaaccccgccactttggcgcgggacgccggcattctggcgacgcagggatac
aagttgatcaaggccggggtaatggatatgttcccgcatacggcccatgtcgagtcaatg
gccttattcgagaaagcataa
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