Hahella chejuensis: HCH_02291
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Entry
HCH_02291 CDS
T00307
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hch
Hahella chejuensis
Pathway
hch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCH_02291 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hch03019
]
HCH_02291 (rhlB)
Enzymes [BR:
hch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HCH_02291 (rhlB)
Messenger RNA biogenesis [BR:
hch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HCH_02291 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABC29114
UniProt:
Q2SJR0
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All DBs
Position
2354853..2356034
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AA seq
393 aa
AA seq
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MTVSDQTTDNAVLFSSLNLHPKLEQAIRDLNFERCTPIQGQTLPHTLQGADLIGQAQTGT
GKTAAFLITILQRLVSNPILTEERFSSEPRALVVAPTRELALQIEKDACALAKHLKLNII
SVIGGTQLDRQRRKLRDEAVDLLIATPGRLLDHLTSADIYLDQVEVLVLDEADRMLDMGF
IPDVKRIVRATPRERQTLLFSATFSEDIKNLARRWTEEPVEVMLAVDHLPAKTVDQRVYM
VESSAKRKLLVNLLKDSETRRVIVFCNRRDETRSLSEALNRHSIKNELISGELPQQKRLK
TLERFRRGDFRVLVATDVAGRGLHIDGVTHVVNYNLPDDPEDYVHRIGRTGRAGATGVSI
SFACEDDSFLIPELEKYLGHELALIHPDDDLLQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacagttagtgatcaaacgacggataacgccgtcctcttttcttctctgaacttacat
ccaaaacttgagcaggctattcgcgatctgaattttgagcgctgcactccgattcagggg
cagacgctgccgcacacgctgcaaggcgcggacctgatcggtcaggcgcagacaggcacc
ggcaagaccgccgcgtttctgattaccattctgcagcgactggtttccaatcccatccta
acggaagaacgcttctccagcgagccgagagccctggtggtggcgccgacccgggaactg
gcgctacagatcgagaaagacgcctgcgcgctcgccaaacacttgaaactgaatattatt
tccgtcattggcggcacccagcttgaccgtcaacgcagaaagctgcgggacgaagccgta
gatctgctgatcgcaactccgggccgtctgctcgatcatctcactagcgctgatatctat
ctggatcaggtggaagtgctggtgctggatgaggcggaccgcatgttggacatgggcttc
atccccgacgtcaagcgtattgtccgggcgacgccgagagagcggcagactctgttgttc
agcgccacattcagtgaggacatcaagaatctggcgcggcgctggaccgaagagcccgta
gaggtcatgctggcagtggatcatcttcccgccaaaaccgtggatcagcgtgtttatatg
gtggaaagcagcgccaagcgcaagctgttggtgaatctgttgaaggacagcgaaacccgc
cgtgtgatcgtattttgtaaccgccgcgacgaaacccgcagtctgtcggaggctttgaat
cgtcattccatcaagaatgagctgatatccggtgaattaccccagcaaaaacgcttgaaa
acactggagcgcttccgtagaggcgacttccgcgtgctggtcgccaccgatgtcgccggc
cgtgggctgcatattgatggggtgactcacgtggtcaattacaatcttcccgacgacccg
gaagactacgttcaccgtatcgggcgcaccggtcgcgcaggcgcgacaggagtctccatc
agtttcgcctgtgaggacgattccttcctcattccggaactggagaaatacctgggtcat
gagctggctctgatccacccggatgatgatttactgcagtag
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