Hahella chejuensis: HCH_02616
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Entry
HCH_02616 CDS
T00307
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hch03016
]
HCH_02616 (rnd)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HCH_02616 (rnd)
Transfer RNA biogenesis [BR:
hch03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HCH_02616 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ABC29406
UniProt:
Q2SIW8
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All DBs
Position
2685157..2686353
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AA seq
398 aa
AA seq
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MPNDTPLSAIYPPDYESRWIDTPAALQEALLRLEKTDWLAVDTEFIRGTTFYPAPALLQL
YDRQCVYLVDMLKITDWSGVSRLFESRDILKVVHACSEDLELFNCVGLSQPCGLIDTQVA
NALLDGELNEGLQSLVRQNLGIELEKHATRSDWTQRPLTDKQIQYAQEDVVVLWPLYQKL
AEALRLSGKYEIALEEGEAMRLAAAGVQDMGRYYLKLRGGWRLRKGAQQLLAKLAAWREQ
EARGRDIPRKKICPDDELIAIAQRRPRTLGQLTEITSIQGAGLRRYGAELVGMVREHMKA
DGDEPETGFEMIRPPIPREYQDLVKKVKKLTQKLAREHRINVGLLASRGLLEEFVYWHIQ
GGAGTQPQLLQGWRGRICSAPLERWLQDDRSVPPRQSP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaacgatacgcctctctccgctatatatccgccggattatgaaagtcgctggata
gatactcccgctgcgttgcaggaagcattgctgcgcctggaaaagaccgactggctggcg
gtggatacggaatttatccgtggaaccacgttttatcccgcgccggcgttgctgcagctc
tatgatcgccagtgcgtgtatctggtggacatgctgaaaatcaccgattggagcggtgtc
agtcgactgttcgagagtcgcgacattcttaaagtagtgcatgcctgcagtgaggatttg
gagttatttaactgtgttggcttatcccagccatgcggcttgatcgatacacaggtcgcc
aatgcgttgcttgatggtgagctgaacgaagggttgcagtcgctggtgcgacagaatctg
ggtattgagctggagaagcacgccacgcgttcagactggacgcaaagaccgcttacagac
aagcaaattcaatatgctcaggaagatgtggtggtgttgtggccgctctatcagaaactg
gcggaagcgttgcgtctgtccggcaagtatgaaattgcgttggaagagggcgaagccatg
cgtctggcggcggccggcgtgcaggatatgggacgctattacttgaagttgcgtggcggg
tggcgtttgcgcaaaggcgctcagcaattattggcgaagctggcggcatggcgtgagcag
gaagcaagaggaagagatatcccgcgtaagaaaatctgccctgacgatgagttaatcgca
atcgctcaacgccggccccgaaccttgggacagctgactgaaattacttccatccagggc
gcaggcctgcgtcgttatggggcggagctggtggggatggtgcgtgagcatatgaaggcc
gatggcgatgagcctgagactggttttgaaatgatacgtccgccgattccgcgggaatat
caggacttggtaaagaaagtaaaaaaactgacgcaaaagctggcgcgagagcatcgcatc
aacgtgggtctgctcgccagtcggggattgctggaagagtttgtttattggcatatccag
ggcggcgcgggaacgcaaccgcagttgctgcaaggctggcgcggtcggatttgcagtgcg
ccgctcgaacgctggctgcaggacgacaggtcggtcccaccacggcaatcaccgtaa
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