Hahella chejuensis: HCH_02757
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Entry
HCH_02757 CDS
T00307
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hch
Hahella chejuensis
Pathway
hch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCH_02757 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_02757 (xth)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HCH_02757 (xth)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HCH_02757 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
S_locus_glycop
Motif
Other DBs
NCBI-ProteinID:
ABC29542
UniProt:
Q2SII2
LinkDB
All DBs
Position
complement(2835797..2836609)
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AA seq
270 aa
AA seq
DB search
MRIVSFNVNGVRSRLHQLKELISQYQPDIIGLQETKVIDELFPLEAINEMGYQAEYYGQK
GHYGVALLSKQPALRCFKGFEGDGEEAHKRWIVGEYAVGGQTLVVCNGYFPQGENRSHPD
KFPNKQRFYAGTLDFLQQRSPDQPIVVMGDMNVSHTDSDIGIGEENRKRWLRTGKCSFLP
EEREWLNRLLDWGLVDTFRQHFPDVKDRYSWFDYRSRGFEDNPKRGLRIDLILATQPLAA
RCVDAGVSYEIRSMEKASDHCPIWADFDLG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgtctcattcaacgtaaacggcgtacgttcacgtcttcatcagctgaaagaa
cttatcagccaatatcaaccggacatcatcggcctgcaggaaaccaaagtcatcgatgag
ctgtttccactagaagccatcaacgagatgggctatcaagcggagtattatgggcaaaag
ggccactatggcgtcgccctgctcagcaagcagcccgcgttgcgctgtttcaagggattt
gaaggcgacggtgaagaggcgcataaacggtggattgtgggcgagtacgcagttggcggc
caaacgcttgtagtttgcaacggctattttcctcagggtgagaacagaagccaccccgac
aaatttcccaacaaacaacgtttttacgccggaacgctggacttcctgcagcaacgctcc
ccggatcagccaatagtggtgatgggagacatgaacgtttcccatacggacagcgacatc
ggcatcggcgaagaaaaccggaaacgctggctaagaaccggcaagtgcagcttcctgccc
gaggagcgagagtggctgaaccgcctgctggattgggggcttgtggacacattccgccag
catttccctgacgtcaaagatcgctacagctggttcgattaccgtagtcgcggctttgag
gacaatcccaagcgcggcctgcgtattgacctgattctggccacacaaccgttggcggcg
cgctgcgttgacgcaggcgtatcttacgagatcaggagcatggagaaagcctccgaccac
tgcccgatctgggctgattttgatctggggtga
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