Hahella chejuensis: HCH_04162 Help Entry HCH_04162         CDS       T00307                                  Symbol lhr Name (GenBank) Lhr-like helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism hch  Hahella chejuensis Brite KEGG Orthology (KO) [BR:hch00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:hch03400]     HCH_04162 (lhr) Enzymes [BR:hch01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HCH_04162 (lhr)     5.6.2.6  RNA 3'-5' helicase      HCH_04162 (lhr) DNA repair and recombination proteins [BR:hch03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HCH_04162 (lhr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C ResIII WH3_Lhr AlkZ-like Cas3-like_C_2 AAA_25 AAA_22 E2_bind Motif Other DBs NCBI-ProteinID:  ABC30871 UniProt:  Q2SEQ3 LinkDB All DBs Position 4298290..4302708 Genome browser AA seq 1472 aa AA seqDB search MSQALALFHPLIAEWFAANLGAPTDIQSKAWPRIASGEHCLITAPTGSGKTLTAFLWALN RFATGELQPGRTRILYISPLKALNNDIRNNLSRPLAELTACFERKGEPFPLIRAQTRSGD TPSGERRQMLRQPPEILITTPESLNLLLSSQSGLSLLQDLDTVIIDEAHSLLGVKRGAYL ISAVERLVDLSGEFQRIALSATINPVSAAADFVAGYELDVRQPDYARNPQYRKRPVTLVE SHAAKHYRLSVNYPAAIAHRSADKHLWDALAETLLTRIQANRATLIFTNNRALCEKLTYK INQAADAMVAYAHHGSLSREIRTEVERRLKGGELAAIVATSSLEMGIDIGALDEVVLVQT AGSVAAAIQRVGRAGHNVGDVSVGSLFPTHPQDFLESAVLAKAIMEKDLEPVRPLQCPLD VLAQVIISMTGVATWDLDELYAHLRMSSVYHNLSRRQFDLLIDMLAGRYAESRIRELQAR VSVDRIDNAITARPGALLSLYQSGGVIPDRGYFHLRHQDSSARIGELDEEFVWEAKIGQS FTLGAQFWQIQKITHNDVFVLPAKAGASTPPFWKAESISRNFHFSEQIGLFLEHLDANLD APDIVATLQSQYYMTAEVADSLLDFLRRQRAHTGRPLPHRHHLLVEIVDSILGHSHGRQM VLHTGWGAEVNRPWGMALEAAWLESFSEQPVVYVSNECIVLQMPEEIPVDAILSLVSPER IEALLRARLEGSGFFGARFRECAGRALLLSKGKFNERRPLWMSRLQSQKLLNSVLKYEDF PILLETWRTCLQDEFDLTALKQLLEELQTEQIQWSVANTRTPSPMAQNIAWEQVNLYMYK DDTPTSDKTSNLSEDLLRELLYNDELRPTVNAELCQRFVQKRQRLAPGYAPDSARDLLDW IKERGAIPDSEWRELLFCIESESGNETLQDMLSATETKIIRLERRNAQVIVARENQASFA QAFYPEADADAESDALFDTLLGEWLRFYGPVSATEISLWLGVDPQRLQRALDDLVEARAI VAGPLIEGNAELRYCDRENFEILLHMARKEAAPEFAPLPLEQLPLFLHCWQTLTCERDDD PHERLFDIVQRLQGTPAPAALWENEILPARLPDYNPALLDHLFQESDLEWLGVEEGKTLF CFAADLDLLDAPAPLNEEAAEDLRALFPDVDSRYDFQALSGKSGLDNTTLTERLWDWVWK QRINNDAFAALRRGVENKFTIPNLPTQSSGRPPSRRRAMRHSFAQSKQAANSPGTWRQVR WPLRQDDPITEQERGKDRARLLLSRYGVVFRELLQRELPEMRWSAVFRSLRLMELSREII GGYFFKDIPGPQFITPNALQMLQNGLPQTRLYWLNATDPASLCGLGLTGLKQKLPKRLDS IHMSFMGPELIMVARRNGKQLDIMIPPDHPDLDACLAPLSNLLHRSCQPLKSINLDTING EKAVDSPYLPHLSRLFDVQKGYKDVALNRKLL NT seq 4419 nt NT seq  +upstreamnt  +downstreamnt atgtcccaggcgctggctttatttcacccacttatcgcggaatggttcgcggccaaccta ggcgcgcccacggatatccaaagtaaagcctggccgcgcatcgcttccggcgaacactgc ctgattaccgctcccaccggcagcggcaaaaccctcaccgcctttctctgggctctcaac cgcttcgctaccggcgagctgcaaccgggccgtacgcgcatactctacatttcgccactg aaagcgctgaataacgatatccgcaataacctcagccgtccgctggcggaactgacagcg tgctttgagcgtaagggggagcccttcccgcttatccgcgcacagacccgcagcggcgac accccctcaggcgaacgccgtcagatgctgcgccaaccgccggaaattctcatcaccacg ccggaaagcctcaacctgctgctgagttcccagagcggccttagcctgctgcaggacctg gatacggtcatcattgatgaagcgcattctctgctgggcgtcaaacggggcgcttacctg atctccgccgtggagcgtctggtggatctgtccggtgagtttcagcgcatcgctctgtcc gccaccattaacccggtctccgccgccgcggactttgtcgccggttacgaactggatgtc cgtcagcctgactatgcgcgcaatcctcaatatcgcaagcggccggtcacgctggtggaa tcccacgccgccaagcattaccggctcagcgtcaactatccggccgccatcgctcaccgc agcgcggacaaacacctctgggacgctctcgcggaaaccctgctgacgcgtattcaggcc aatcgcgccacgctcatcttcaccaataatcgcgccctgtgcgaaaagctcacctacaag atcaatcaggcggcggacgcgatggtggcttacgcgcatcatggctcgctgtcgcgggag atccgcaccgaggtggagcggcgcctcaagggaggcgaactggccgctatcgtcgccacc agctctctggagatgggcatcgatatcggcgccctggatgaagtcgtgctggtgcagacc gccggttcggtggcggcggcgatccagcgcgtggggcgggccggccataacgtcggcgac gtcagcgtcggctcgctgtttccgactcatccccaggactttttggagtccgctgtgctg gccaaagccatcatggaaaaagacctggagccggtgcgcccactgcagtgtcccctggat gtgctggcgcaggtgattatctccatgacgggggtggcgacctgggacctggacgaactg tacgcgcacctgcgcatgtccagcgtttaccacaatttatcccgtcgccagtttgatctg ctgattgacatgctggcgggacgttacgcggagagtcgtatccgcgaactgcaggcgcgc gtatccgtggatcgcatcgacaacgccatcacggcgcgccccggcgccctgctctcactg tatcaatccggaggcgtcataccggatcgcggttattttcatctgcgccaccaggacagt agcgcccgtatcggcgagctggacgaagagttcgtctgggaagcgaaaatcggtcaaagc ttcactctgggcgcgcagttctggcagattcagaaaatcacccacaacgatgtgttcgtg cttcccgccaaagccggagcgtcaacgccaccgttctggaaagccgaatccatcagccgc aacttccacttctccgagcaaattggcctgttcctggagcatctcgacgccaatctggac gcccctgatattgtcgccaccttgcagtcgcaatattacatgacggcggaggtggcggac tccctgctggattttctgcgtcgccaacgggcgcacacgggacgccccctgcctcatcgc caccatctgctggtggagatcgtcgactctatcctggggcacagccacggccgtcagatg gtgctgcacaccggttggggcgctgaagtgaatcgcccctggggcatggctctggaagcc gcctggctggaatccttcagcgaacagccggtggtgtatgtcagtaacgaatgcatcgtc ctgcagatgccggaggaaattcccgtcgacgccattctctccctggtttctccagagcgg atagaagccctgttacgcgcccgcctggaaggctccggtttttttggcgcgcgcttcaga gaatgcgcaggccgcgcattgttgctcagcaaaggcaaattcaacgagcgtcgtcctttg tggatgagtcgcctgcagtcgcagaaattgctgaactccgtgctcaagtacgaggacttc cccattctgctggaaacttggcgcacctgcctgcaggacgaatttgatctgaccgcgtta aaacaactgctggaggagctgcaaaccgaacagattcaatggtccgtcgccaatacccga acgcccagccccatggcgcagaatatcgcctgggagcaggtcaacctgtacatgtacaag gacgacacgcccacctcggacaagacctccaatctcagtgaggacctgctgcgagagctg ttgtacaacgatgagctgcgtcccaccgtaaacgctgaactgtgtcagcgcttcgtgcag aaacgccagcgtctggcgccaggttatgcgccggacagcgcgcgagacctgttggactgg atcaaggaacgcggcgctattccggattctgaatggcgcgaactgctgttctgtattgaa tcagagtccggcaatgagacactgcaagacatgctgtcggcgacggaaaccaaaattatt cgcctggagcgccgcaacgcccaagttattgtggcgcgggaaaaccaggcctccttcgca caggcgttctatccggaagcagacgcggatgcggaatccgatgcgctcttcgatacgctg ctgggcgaatggctacgcttttacgggccggtgtccgccacagagatatccctctggctt ggcgtcgacccacaacgtttgcagcgggctctcgacgatctggtggaagcgcgcgcaatc gtggccggccccctgatcgaaggcaatgctgagctgcgctattgcgatcgggagaatttc gaaatcctcctgcatatggcgcgcaaagaggccgcgccggaattcgcccccctccccttg gagcagcttcccctgttcttacactgctggcagaccctaacgtgcgagcgtgacgacgat ccccatgagcgactcttcgatattgtgcaacgcctgcagggaacgcccgcccctgctgcg ctgtgggagaacgaaatacttcccgcgcgattgccggactacaaccctgccttactggac catctgtttcaggagtccgacctggagtggcttggcgtggaggaaggcaaaaccctattc tgcttcgccgccgatctggacctgcttgacgcccctgcgcctctcaacgaagaagccgcc gaagacctgcgggctctgtttccagacgtcgacagccgctacgatttccaggctctctcc gggaaaagcggactggacaacactacgctgacagaacgcctatgggactgggtatggaaa caacgcatcaacaacgacgccttcgccgcgttgcgcagaggagtggaaaacaaattcacc attccgaatctgcccactcagagttccggcagaccgccatcccgtcgtcgggccatgcgc cattccttcgcccagtcgaaacaggcggcgaacagtcctggaacctggcggcaagtgcgc tggcccttgcgacaggatgatcctataacggaacaggagcgcggcaaggatcgcgcacgc ctgctgttaagtcgttacggtgtagtgtttcgcgaactcctgcaaagagagcttccagaa atgcgttggagcgcggtgtttcgctccctgcgcctgatggagctgtccagggaaatcatc ggcggctactttttcaaggatatccccggcccgcagttcattacccctaacgcgctgcaa atgctgcagaacggcctgccgcaaacccgactgtactggctcaatgcaaccgatcccgcg tccctgtgcggactgggtctgacggggctgaaacagaagctgccgaagcggctggactcc atacatatgagtttcatggggccggaactgatcatggtggcgcgccgtaacggcaaacag ctggacatcatgatcccgccggatcacccggacctggacgcctgtctggccccgttgagc aacctgttgcaccgatcctgtcagccgctgaaaagcattaacctggacactatcaacgga gaaaaagccgtcgacagcccttaccttccgcacctgagtcgtctgttcgacgtgcagaag ggatacaaggacgtcgcgctcaaccgcaaactgctgtaa

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