Hahella chejuensis: HCH_04977
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Entry
HCH_04977 CDS
T00307
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hch03032
]
HCH_04977 (ihfB)
03036 Chromosome and associated proteins [BR:
hch03036
]
HCH_04977 (ihfB)
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_04977 (ihfB)
DNA replication proteins [BR:
hch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HCH_04977 (ihfB)
Chromosome and associated proteins [BR:
hch03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HCH_04977 (ihfB)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HCH_04977 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Ribosomal_L11
Motif
Other DBs
NCBI-ProteinID:
ABC31667
UniProt:
Q2SCF7
LinkDB
All DBs
Position
complement(5114855..5115151)
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AA seq
98 aa
AA seq
DB search
MTKSELVEIIAQKQPQLSIKDVELAVKTIIEYMSQSLSQGQRIEIRGFGSFSLHYRAPRV
GRNPKTGETVHLPAKYVPHFKPGKELRDEVNASLKAGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagagttagtcgagattattgcgcaaaaacaaccacaactttcgataaaa
gacgttgagctcgcggttaaaacgatcatagagtacatgtcacaatctctgtcccagggg
cagcgtatagaaatacggggattcggcagtttcagtctccactatcgcgctccacgggta
gggcgaaatcccaaaacaggtgagactgttcatcttcctgcgaagtatgtgccgcacttc
aagcctggtaaggaattgagagatgaggttaacgcaagtctcaaagccggatattga
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