Hahella chejuensis: HCH_05052
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Entry
HCH_05052 CDS
T00307
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hch
Hahella chejuensis
Pathway
hch03030
DNA replication
hch03430
Mismatch repair
hch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCH_05052
03430 Mismatch repair
HCH_05052
03440 Homologous recombination
HCH_05052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hch03032
]
HCH_05052
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_05052
Enzymes [BR:
hch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCH_05052
DNA replication proteins [BR:
hch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCH_05052
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCH_05052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABC31735
UniProt:
Q2SC89
LinkDB
All DBs
Position
5208537..5209229
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AA seq
230 aa
AA seq
DB search
MTLDQLTDFFSMDADVKALARWSPPSPGQALEDIRWVAADVETTGLNIKKDVVIAIGAVE
INDLSICLEQSFELLIDADTHLESDNILIHGLSQQTLSQGAHPKEAIHSFLSYAHGAALL
AFHAPFDKAMLEKEARTHLGVSSRLPFYDVAEWLKALCPEAPSHLRSLDDWSHYFGLYND
QRHHAACDAMAAAELALICLQKARSLGVTTWKGLQDKIAARMKLEKMRAH
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggatcaattaacggactttttttccatggacgccgacgtcaaggctctcgcc
cgttggtcgccgccttcgccggggcaagcgctcgaagatatacgctgggtggctgcggat
gtggagacaaccggccttaacatcaaaaaagatgtggttatcgctatcggcgcggtggaa
atcaatgatttgagcatctgcctggaacagtcattcgagctgctcatcgacgcagacacg
catttggaaagcgacaacatcctgatccacggactgtcgcagcaaaccctcagtcagggc
gcgcaccccaaagaggcgattcattcctttctcagctacgcccacggcgccgctctgctc
gccttccatgctcctttcgacaaggccatgctggaaaaagaagcccgtacgcatctgggc
gtcagcagccgcctgccattctatgacgtggcggagtggttgaaagcgttatgcccggaa
gcgccctctcatttacgcagtctggatgactggtctcactatttcggcctctataacgat
caacgtcatcatgccgcctgcgacgccatggccgccgctgaactggcgttaatctgcctg
caaaaagcccgtagtctaggagtgacgacctggaaaggactgcaggataaaatcgccgcg
cggatgaaactggaaaaaatgcgcgctcattga
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