Hahella chejuensis: HCH_05501
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Entry
HCH_05501 CDS
T00307
Name
(GenBank) sigma54-dependent transcription regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hch03000
]
HCH_05501
Transcription factors [BR:
hch03000
]
Prokaryotic type
Other transcription factors
Others
HCH_05501
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
ATPase_2
AAA_19
DUF294_C
NTPase_1
AAA_2
T2SSE
AAA_18
MCM
AAA_29
AAA_14
AAA_30
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABC32163
UniProt:
Q2SB11
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Position
complement(5636470..5638104)
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AA seq
544 aa
AA seq
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MAIRKRKHKVVFGFLGSTMDAVSRRRGKYEKRWQRWRPTVSIAQHPEAFPVDRLVLLYNP
QDRELADEVIADIGDVAPKLQVDLQQLDFDAPWDLHKVFPKLYQFIDGYPFDTEKEEYFF
HITTGSHIQQISIFLSVGARYFPGKLLQTAPSRDHEGGSKVEVIDLDNAPRSVAEIFSQS
RKRDTDYLKSGIDTRNADFNQLIKQIETVAIRTRAPILITGPTGAGKSRLGSRIYELKRK
RQDVKGAFVEVNCATLRGDNAMSALFGHRKGAFTGAVEKRDGLLKEADGGVLFLDEIGEL
PLDEQAMLLRAIEDKRFFPLGADKEENSDFQLIAGTNRDLRKDVIDGRFREDLFSRINLW
TYRLPGLAERHEDIEPNLDYELQRFERENGIRVRFSQESRKRYLKFACSLSALWKGNFRD
LNASVTRMATLAEAGEIDVALVESEMERLGYLWGMELRSTTQQVEAILLENLLSPEQIEE
MDHLDQVQLEAVVRACRDSSSAAEAGRRLFAASRLKKRRLNDSQRVAAILDKYGLHFDQI
KNAW
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatcaggaaacgtaaacataaagtggtgtttggatttttaggctccactatggac
gccgtgtcacggcgccggggcaaatacgaaaagcgctggcaacgctggcggcctaccgtg
tccattgcgcaacatccagaagcgtttcctgtcgatcgcttagtgttgctatataacccg
caggatcgcgaactggcggacgaagtgatcgccgatattggcgacgtggcgcccaagctt
caggtggatctgcagcaactggatttcgatgcgccctgggatctgcataaggtattcccc
aagctgtatcagtttattgatggctacccctttgatacggagaaggaggagtacttcttt
catatcaccaccggctcccacattcagcagatatctatctttttgtctgtgggcgcccgc
tatttccccggcaagctgctgcaaaccgcgccgagccgggatcatgaaggcggcagcaag
gtggaagtgatcgatctggataacgcgccgcgctccgtggcggaaatattcagtcaatcg
cgcaagcgcgacaccgattatttgaaatccggcatcgatacccgtaatgcggatttcaat
cagttgataaagcagattgagaccgtggcgattcgcactcgcgcgccgattttgattacg
ggaccgaccggcgccggtaaatcacggctgggctctcgtatctacgaactgaagcgcaag
cgtcaggatgtgaaaggcgcttttgtggaggtcaactgcgccaccttgcgtggggataac
gccatgtccgcattgtttgggcatcgcaagggcgcctttacgggagcggttgagaagcgg
gacggcttgttgaaggaggccgatggcggcgtgttgtttctggatgagatcggtgagctg
ccgttggacgagcaggcgatgctgctacgggccatagaggataaacgctttttccctctg
ggagcggataaagaagaaaacagcgactttcaactcatcgccggcactaacagagacttg
cgcaaggatgttatcgacggacgcttccgggaagatttgttctcgcgcatcaacctgtgg
acatatcgtttgccggggctggcggagcggcatgaagatatcgaacctaatctcgactat
gaattgcagcgctttgagcgtgaaaacgggattcgcgtgcgcttcagtcaggaaagccgc
aagcgctatctcaagttcgcctgctctctcagtgcgttgtggaaaggcaactttcgcgac
ctcaacgccagcgttacgcgcatggcgacattggcggaagcaggagagatcgatgtggcg
ctagtggagtcggagatggagcgtctggggtatctctgggggatggagctgcgctcaacc
actcagcaggtggaggccattctgctggaaaacctgttgtcgccagagcagatagaggaa
atggatcacctggatcaggtgcaattggaagccgtggtgcgcgcttgccgggacagtagt
tccgctgcggaggcgggtaggcggttgtttgccgcctcgcgtctgaagaagcggcgtttg
aatgacagccagcgcgtggcggcgattctggacaagtacggcctgcatttcgaccagata
aaaaacgcctggtag
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