Hahella chejuensis: HCH_05589
Help
Entry
HCH_05589 CDS
T00307
Name
(GenBank) FOG: TPR repeat
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
hch
Hahella chejuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_1
TPR_2
Porin_4
T7SS_EccA1_N
NtrZ
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ABC32248
UniProt:
Q2SAS6
LinkDB
All DBs
Position
5711522..5713966
Genome browser
AA seq
814 aa
AA seq
DB search
MTLFPTEPSIRLSARKLARLVVSAVALSQAIPALAASPVDEKREQFVISARAGHLKEAIK
GLSKLYKQTHDKAVLNDLIALYSWNGELDSALALCNPCSLKALNNDSLAILAKAQRNQKN
FATAAELYRLLTKRSPKSRDAWLGLALTSAEMGEDVHAQKAIANYRELTRPSVERFENEL
YIMTVLQDKVGEIGVLQDYYSFSPDNRDIGLRLYKAAIDLGAATAADRIVKAHPDWFKGI
DHYWLEYYKSTLNIRSGAKSSRPDILDKGIADLQALYDKVPAEHSLRGNIERDIFYGLVV
AKRFDEASDMLPVIETRQPLPAYIEEARADLYAANRRPFKALPIFKQLYAQAPTLELGKK
LYYAHMDAEQYEEGGALLQKLLDAQPPRRWDFTGSFKVSNENYQQLREQSIIHQAWSGDL
DSAEKSLQAALVEAPGNPWLWMDLGNVQRWQGRFSDAEYSYRRADSMLSGNAQGSARRSL
WLTQLEKGDWRGLNAKREELNAAYPAHEQREINKRWDEASAPFLSVNASRVKSSNSKPGQ
AQNSREWRYDARLYSQRWEGQRIFIHDQKMYGEWEERDLFARYTGVGADLSFYPFTLELE
AGSGGKLNDKAYFWSTASWTLFDDLSLQASYRYNPSETPLRGLYDESYMRQWGLGATYRF
TPRISLGTSASLSNFTDGNDRQAISAWLETQLWQTPRYKLSGVVSAGGSDNDKVPASYFN
PTSDRNYGAELRHSYRIKVSDDWDLDQFLETRVNQYRQEGYDPAIGWEISYSQQWRWRDQ
VSVRLGVSRDKATYDGEPENGTLIFANFEMRFMQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgactctatttcctacggagccgtctatacggctatccgcgcgcaaactcgcgcgcctg
gttgtcagcgcggtcgctctttctcaagctattcccgctctggcggctagccccgttgat
gaaaaacgggagcagttcgtcatatccgcccgcgccggacatttaaaggaagccatcaaa
ggcctctccaaactgtataagcaaactcatgataaagcggttctgaatgacctgattgcg
ctgtactcctggaatggcgagctggatagcgcgctagcgctgtgtaatccatgctctctc
aaagcgcttaacaacgacagtctggcgattttggccaaggcgcagcgtaatcaaaaaaac
ttcgctaccgcagctgagctttacagacttctgaccaaacgcagccctaaaagccgggac
gcatggctgggactggctctgaccagcgcagaaatgggagaagacgttcacgctcaaaaa
gcgatcgctaattacagagaattgactcgtcccagcgtcgagcgttttgagaatgagctt
tatatcatgacggtattgcaggacaaggtcggcgagatcggcgttctgcaggactattac
agcttctcccccgacaatcgggacatcggactgcgtctttataaagccgccatcgatctc
ggcgcagccaccgcagcggacagaatcgtcaaggcgcatccggactggttcaaaggcatc
gaccattactggcttgagtactacaagtccactctgaacatacgcagcggcgccaaatca
tcccgcccggatatactggataaaggcattgccgatctgcaggcgctatatgacaaagtt
cctgcggagcactccctgcgcggcaatatcgagcgggatatcttttacggactggtcgtc
gcgaaacgctttgatgaagccagcgatatgctaccggtcattgaaacgcggcaaccgctt
ccagcctatatagaagaagcgcgcgcagacttatacgccgccaaccggcgtcccttcaaa
gcgttgccgatattcaagcagctatatgcacaagcgccaacattagagctgggcaagaag
ctgtattacgcccatatggacgcagagcaatatgaggaaggcggggctctgctgcaaaaa
ctgttggacgcccaacctcctcgacgctgggacttcaccggcagctttaaggttagtaac
gaaaattatcaacaattgcgcgagcaaagcattattcatcaggcctggagcggcgacctc
gattcagcggaaaagtcgctgcaagccgccctggtggaagcgcccggcaacccctggttg
tggatggacttgggcaacgtgcaacgttggcagggccgtttcagtgacgcggaatacagc
tatcgtcgcgccgactcaatgctttccggcaacgctcaaggcagcgccaggcgcagctta
tggctgacgcaactggagaaaggcgactggcggggactcaacgccaaacgcgaagaactg
aacgccgcatatcccgcccacgagcagagagaaatcaacaaacgctgggatgaagcatcc
gcacctttccttagcgtcaatgcgagtcgcgtcaaatccagcaacagcaagccggggcaa
gcgcaaaactccagagagtggcgttatgacgcacgtttatattcgcagcgctgggagggg
caacgtatctttatccatgaccagaaaatgtatggagaatgggaagaacgcgacctcttc
gctcgctataccggcgttggcgccgacctgagtttttatcctttcacattggaattggaa
gcgggttccggcggcaagcttaacgacaaagcttacttttggagcaccgccagctggact
ctgtttgacgatctgtcattgcaggcgagctaccgttataacccatcggagacgccatta
agaggtctttacgatgagagttatatgcgtcagtggggtcttggcgccacatacaggttc
acaccccgaatttctctgggaacttccgcttcacttagcaactttaccgacggcaatgac
cgtcaagccatcagcgcctggctggagactcagctatggcaaacgccgcgctataagttg
tccggcgtcgtcagcgctggcggcagcgacaatgacaaagttccggccagttactttaac
cctacatccgaccgcaattatggcgcagagctgcgccacagctaccgcatcaaagtgtct
gacgattgggacctggatcagtttctggagaccagagtcaaccaataccgccaggaaggc
tacgacccggctatcggctgggaaatcagctacagccagcaatggcgttggcgggatcag
gtcagcgtcaggctgggagtcagtcgcgacaaagccacctacgacggagagcccgaaaac
ggcacgttgattttcgctaattttgaaatgaggttcatgcagtga
DBGET
integrated database retrieval system
