Hahella chejuensis: HCH_05712
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Entry
HCH_05712 CDS
T00307
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hch
Hahella chejuensis
Pathway
hch03420
Nucleotide excision repair
hch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCH_05712
03430 Mismatch repair
HCH_05712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_05712
Enzymes [BR:
hch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCH_05712
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCH_05712
MMR (mismatch excision repair)
Other MMR factors
HCH_05712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5710
AAA_19
UvrD_C
UvrD_C_2
SLFN-g3_helicase
ResIII
UvrD-helicase
AAA_22
PhoH
AAA_16
DEAD
AAA
nSTAND3
NPHP3_N
Mg_chelatase
AAA_30
AAA_11
IstB_IS21
ATPase
T2SSE
AAA_5
AAA_18
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
ABC32368
UniProt:
Q2SAF6
LinkDB
All DBs
Position
complement(5826907..5828271)
Genome browser
AA seq
454 aa
AA seq
DB search
MRMPNSRQISDEQETIYLDAPMSGNILISGPPGTGKTVLAFLRAGTLLKRKRSVTVLMYN
RVLQKYTSNAVEVDGEAVKTCTLHSWLFKWWKTNKIASKVSYPGRVYLDCPFEEKAAAKG
LGAQWDNYEKKWWISHELHQQIGQRFSQWINDKSDQSIFPPRLAPFLYDWEKMSISLVTH
PMREYPLTDWGHLIVDEGQDFPPEMYHFFKRVSLVLNDVNLTILADENQRLTENNSTLNN
IKEELSISKENEFLLTKNFRNTLQIAKLANCFYVGLSTGCPLLPDRHGDKPLLISSTDLD
GQISHIVKVLNSRSPAEVGVIVPRDSIRKEVVAKLEALIGDRYSVQTYSSNQDEAKDPND
LVFDQVGTVTVLNYQSCKGLEFDIVFLPELQDYQVDNSELDNFKMNMYVMCSRARDALFL
TYSSHLDEKPDILTHLPVNETDILESISWQNHSQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcctaactctagacagatcagtgacgagcaagagactatctatcttgatgcg
ccaatgtccggcaatatattaatttccgggcctcctggtacaggaaaaacagtgctcgct
tttcttcgtgcgggcacattactgaaaagaaaaagaagcgtaactgtactcatgtacaac
agagtacttcaaaagtatacatccaatgcagttgaagtcgatggagaggctgtgaagacc
tgtactctccatagctggttattcaagtggtggaaaaccaataaaatagcatcgaaagta
tcctatccaggaagagtatacctagactgtcctttcgaagaaaaggcggcagcgaaggga
cttggagctcaatgggacaattatgaaaaaaaatggtggataagccatgaactgcatcaa
caaattggtcagcgtttctctcagtggattaacgacaaaagcgatcaatctatttttcct
ccacgcttagccccatttctgtatgattgggagaaaatgtccatatcactagtgacacac
ccaatgagagagtacccattgaccgattggggacatctcatagttgatgagggccaagac
ttccccccggaaatgtatcacttttttaaaagggttagtctggtgctgaatgacgtaaac
ttaacgatactagcagatgaaaatcaaagacttactgagaataactcgacgttgaataat
attaaagaagaactatccatctcaaaagagaatgaatttcttctaacaaagaattttcgt
aatactctacagatagccaaactcgcaaactgcttctacgtaggcctctccacagggtgt
ccattgttacctgaccggcacggagataagcccttactaattagctctaccgatctggat
ggacaaatcagccatatagtgaaggtcctaaattcgaggtcccccgctgaagttggcgtt
atcgttccacgggattccataaggaaggaagttgtagctaagctagaggccttgataggc
gatcgttatagcgtgcagacatactcatccaaccaggatgaggctaaagaccccaacgac
ttagtgttcgatcaggttggaacggtaacagttttgaactatcaaagctgtaaaggtctt
gagtttgatatagtttttttacctgagctacaagattatcaagtagacaatagcgaactg
gacaatttcaaaatgaacatgtatgtaatgtgttccagggccagagacgcactattctta
acatactcatcccatctagatgagaaacctgatatcctcactcatcttccagtaaatgag
acagatatattggaatctatttcatggcagaatcactcacagtag
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