Hahella chejuensis: HCH_05864
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Entry
HCH_05864 CDS
T00307
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hch
Hahella chejuensis
Pathway
hch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HCH_05864 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_05864 (xseB)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HCH_05864 (xseB)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HCH_05864 (xseB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Mce4_CUP1
VWA_2
TMCO5
FliE
DUF4164
Spectrin_5
DUF3984
Motif
Other DBs
NCBI-ProteinID:
ABC32514
UniProt:
Q2SA10
LinkDB
All DBs
Position
5984372..5984650
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AA seq
92 aa
AA seq
DB search
MTEKNANSDVSQSASGSTPDFEDALQRLETLVRKLEQGDLKLEEALVAFEEGVQLTRHCQ
TALQTAEQKVQQLIEERGTPLTKPFDQNDAED
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaaaacgccaactctgatgtcagccagtccgccagcggctccacacccgat
tttgaagatgcgttacagcgtctggaaaccctggtgagaaagctggagcaaggcgatctt
aaactggaagaagctctggtcgcttttgaagaaggcgtccaactcactcgccattgccaa
accgccttgcaaactgcggaacaaaaggttcaacagttaattgaagagcgcggaaccccg
ctaaccaagccttttgaccagaatgacgccgaagactga
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