Hahella chejuensis: HCH_05925
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Entry
HCH_05925 CDS
T00307
Name
(GenBank) sigma 54-dependent transcriptional activator containing CheY-like receiver domain
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
hch
Hahella chejuensis
Pathway
hch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HCH_05925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hch02022
]
HCH_05925
02035 Bacterial motility proteins [BR:
hch02035
]
HCH_05925
Two-component system [BR:
hch02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HCH_05925
Bacterial motility proteins [BR:
hch02035
]
Pilus system
Twitching motility proteins
HCH_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
AAA_16
AAA
HTH_50
AAA_22
VpsR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABC32575
UniProt:
Q2S9U9
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All DBs
Position
6055503..6056861
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AA seq
452 aa
AA seq
DB search
MIKKVLIVDDEPDIRALLEITLSRMQIETRAAENITQAKQLLSEESFSLVLTDMNMPDGN
GIDLVAHIQKQSSNTPVAVITAYGSIDTAISALKAGAFDFVSKPVDLARLRELVNSALKL
PKNDAPKATPQVTQLLGESSTMDKLRGQIRKLARSQAPIYISGESGSGKEMVAKSIHEQG
PRSEGPFVPVNCGAIPSELMESEFFGHKKGAFTGAVENKVGLFQAANGGTLFLDEVADLP
LTMQVKLLRAIQEKAVRPVGEQKEIPIDVRILSATHKDLHSEVDEGRFRQDLFYRINVIE
LRVPSLRQRKEDIPLLANHFLKQLADECEIPNASISKSAMQKLESYYFPGNVRELENIME
RAFTLCEDDVINEEDIHLPKTDTEGLTSDSMELDVPEFDENKVNLEHFLENIEKQAIEKA
LEETRWNKTAAAKKLGISFRALRYRLKKLGME
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaagtactcattgtcgacgacgaacccgatatccgcgcattactggaaatc
actttaagccgcatgcagatagaaacacgggcggcggaaaatatcacgcaggccaaacaa
ctattaagcgaagagagctttagccttgtactgactgacatgaatatgccggacggcaat
ggcatcgaccttgtcgcccatatccagaagcaatcatccaatacgcctgtagcggtcatt
acagcttatggcagtatagacacggcgatttctgcgcttaaagccggcgccttcgacttt
gtctccaagcctgtagatcttgcgcgcctgcgtgagctggttaacagcgcattgaaactg
ccaaaaaatgacgcccccaaagcaacccctcaagtaacccaattgctcggcgaatcatcc
acgatggataagctacgcgggcaaatcagaaaactcgcgcgcagccaggcgcctatctat
atcagcggcgagtcaggcagcggcaaagaaatggtcgccaaatcgatccatgaacagggg
cctcgcagcgaagggccctttgtgccagtcaactgtggcgctatacccagcgagctgatg
gagagcgaattctttggccacaagaaaggtgcgtttaccggcgctgttgaaaataaagtg
gggttatttcaagctgcgaatggcgggaccctgtttctcgacgaagtcgccgatttaccg
ctgacgatgcaggttaaacttctccgcgccattcaggaaaaagcagttcgtccagtcggt
gaacagaaggagatccccattgatgtacgcatactctccgccacccataaagatttgcac
agcgaagtagatgaaggccggttccgtcaggaccttttttatcgaataaatgtcatcgag
ctgagagtcccaagcttacgccaacgcaaagaagacatcccccttctcgctaatcatttc
cttaaacaattagcggacgaatgtgagatccccaacgcatcaattagcaagtcagcgatg
cagaaactggagtcttattattttccaggcaacgttcgcgaactggaaaatattatggag
cgcgcttttaccctgtgcgaagacgatgtcattaacgaagaggacatccatctgcctaaa
acagataccgagggtttaacatccgactcaatggagctggatgttcctgagttcgacgag
aacaaagttaaccttgaacactttctcgaaaacatcgaaaagcaagctattgagaaagcc
cttgaagaaacacgatggaataaaacggctgccgccaagaagctgggcatcagctttcga
gcccttcgctaccgcctgaaaaagctggggatggagtaa
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