Hahella chejuensis: HCH_06193
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Entry
HCH_06193 CDS
T00307
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hch
Hahella chejuensis
Pathway
hch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCH_06193 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hch03021
]
HCH_06193 (rpoA)
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_06193 (rpoA)
Enzymes [BR:
hch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCH_06193 (rpoA)
Transcription machinery [BR:
hch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCH_06193 (rpoA)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCH_06193 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Hus1
Motif
Other DBs
NCBI-ProteinID:
ABC32837
UniProt:
Q2S937
LinkDB
All DBs
Position
complement(6332328..6333332)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSLNEFLTPRTIEVNQINATHAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVVEVE
IDGVLHEYSTVEGVQEDVIEILLNLKNLAIKMHNRDEATLSLNKKGAGPVLASDIQLDHD
VEIANPDMVICNLNSNGDVKMKLKVARGRGYEPADQRNSADDETRAIGRLQLDSSFSPVL
RVAYNVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDQQNEPE
KVEEQEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcattaaacgaatttcttacacctcgtactatcgaggtgaatcaaatcaat
gcgactcacgcaaaggtgaccctggagccgctcgaacgcggtttcgggcatactttagga
agtgcattacgccgcattttgctgtcttcaatgccgggttgcgctgtcgtcgaagttgag
atcgacggcgttcttcacgagtacagcaccgttgaaggtgtgcaggaagatgtgattgag
attcttctgaacttgaagaatctcgccatcaagatgcacaaccgcgatgaagcaacgttg
tccctgaacaagaagggcgctgggccagtactggctagcgatatccagcttgatcatgat
gttgagattgcaaatccagatatggttatttgcaaccttaactcaaatggcgacgttaag
atgaaactgaaagtggctcgtgggcgtggttatgagcctgcggatcaacggaactcagct
gatgatgagacaagagcaattggaagattgcagcttgactcctctttcagcccagtgctc
cgtgttgcttataacgttgaaagcgctcgggttgagcagcgtaccgatttggacaagttg
gttatcgacttggaaacaaacggaacgattgaccctgaggaagcaatccgtagggcggcg
acaattctgcaacagcagcttgctgtctttgtagattttgatcagcaaaatgagccagaa
aaagttgaagagcaagaagagatcgatccgattcttctgcggccggttgatgatttagaa
ctgactgtgcgttcagcgaactgcttaaaagctgagaacatctactatatcggtgatctc
attcaacgcactgaggtggagcttctgaagactcctaacctgggaaagaaatcattaacc
gaaattaaagacgtgcttgcttcacgcggcttgtctttaggtatgcgtcttgaaaactgg
cctcccgccagcattcggggcgatgatcgggtattaggcggctaa
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