Hahella chejuensis: HCH_07086
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Entry
HCH_07086 CDS
T00307
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hch03016
]
HCH_07086 (trmE)
Transfer RNA biogenesis [BR:
hch03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCH_07086 (trmE)
Prokaryotic type
Methyltransferases
HCH_07086 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
ABC_tran
AIG1
Ras
cobW
GTP_EFTU
AAA_28
Roc
AAA_29
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABC33698
UniProt:
Q2S6M6
LinkDB
All DBs
Position
complement(7210154..7211518)
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AA seq
454 aa
AA seq
DB search
MYAENDTIVAIATPPGKGGVGVVRVSGPKARAIAHEVLGYDPKPRHAHYSPFFNEEGDTL
DSGIALLFIAPNSFTGEDVVEFQGHGGPVVLDILVKRIVSLGARLARPGEFSERAFMNDK
LDLVQAEAIADLIEATSEQAAHSAMRSLQGQFSKEIENLIESLIQLRIYVEAAIDFPEEE
IDFLSDGKVLNDLDTLLSQTQSVFASAKQGALMREGMTVVIAGRPNAGKSSLLNALAGRE
SAIVTEIEGTTRDVLREHIHIDGMPLHIVDTAGLRDSDDVVEKIGIERAWKEIDQADRIL
FLVDATQTNEVSPERIWPEFYARIEHHDHITVVRNKIDLSEEAQGIDLSLSHPVIRLSAK
AGNGIDVLREHLKACVGFESHAEGGFMARRRHLEALTVAEKHIQLAKQQLLSANAGELVA
EDLRVAQNALSEITGAFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgagaatgacactatagtcgcaatcgccaccccgccagggaaaggcggcgtt
ggcgttgttagagtatcgggccccaaagcgagggctattgctcatgaagttttggggtat
gaccccaaacccagacatgcccactacagtccatttttcaacgaagaaggcgatactctc
gacagcggtatcgctttgctctttattgctcccaatagtttcacaggcgaagacgtcgtt
gagtttcaggggcacggcggtcccgttgtgcttgatatcctggtaaaacgcatagtctcc
cttggcgcgagattggctcggcctggtgagttctctgaaagagccttcatgaatgacaag
ctggatctggtacaagcggaagccattgcggatctgatcgaggcaacttctgaacaagct
gcgcatagcgcaatgcgttccttgcaaggacagttttccaaagaaatcgaaaacttgatt
gagagtcttatccagctgcgtatatacgtcgaagcagcgatcgattttccagaagaggaa
atagactttctctctgatggcaaggtgttaaatgatttggatacccttctcagtcagaca
cagtccgttttcgccagcgccaagcaaggcgccttgatgcgtgaaggaatgacagtggtt
atcgctggtcgccccaatgccggtaagtccagtttgctgaatgctttggcgggtagagag
agcgccatcgtgacggagattgaaggcactactcgcgacgtattaagagagcatattcat
atcgatggaatgccattacacattgtggataccgcgggattacgggatagcgacgacgtt
gtggaaaaaatcggcatcgaacgcgcctggaaagaaattgaccaggcagatcgtattctc
tttctggtggatgcgacgcaaacaaatgaagtgtctcccgagcgaatttggccagagttc
tatgctcgcatcgaacatcacgaccacatcactgtcgttcgtaacaaaatagacttgagc
gaggaagcacaaggtatcgacctgtcgctttcacatccggtcattcgcttgtcagctaaa
gccggaaatggcattgacgtgttgcgggagcatttgaaagcctgtgttggttttgaaagc
catgcagaaggtgggtttatggcgagacgtcgccaccttgaggcccttactgttgcggaa
aagcatattcagttagccaagcaacaactgctgagcgccaacgccggagaattagtggcg
gaagatctgcgggttgcgcagaatgcgctatcggaaattactggcgcttttacttccgat
gatttattaggacgtatcttttcgtcgttttgtatcggaaagtag
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