Candidatus Hodgkinia cicadicola Dsem: HCDSEM_015
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Entry
HCDSEM_015 CDS
T00938
Symbol
cobD
Name
(GenBank) putative cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00860
Porphyrin metabolism
hci01100
Metabolic pathways
hci01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HCDSEM_015 (cobD)
Enzymes [BR:
hci01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
HCDSEM_015 (cobD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
ACT34204
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All DBs
Position
14191..15039
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AA seq
282 aa
AA seq
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MRRALLKLALALDWCVLGRVRWQVLANPVSVLARPLRWLAAGRFKAGSAYGLALVSGTVA
ASALLGACLHSALASSAWGLFGEVVVVAALSAHKKLIWHVDHVLACVYSAGTNECKRAAQ
LLAGRFAPRDSEDVVCETTLLSLIENLADATVLPLLYYAAGGLPALASYKAIDLLDSLMA
NFSAVNADVASWLAWADDLAGWLPWAALCLGRRGARARLVKAVKFWAVAWFAAALGLRAS
TRAVYFRACVRGAVANVGGRRADGVDLRRAQLLACAVCLALC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcgcgcgcttttaaagctggcgctggcgctggattgatgtgtgttggggcgcgtg
cgctggcaggtgctagctaaccccgttagcgtgctggcgcgccccctgcgatggctggca
gctggtagatttaaagctggttcagcttacgggctagcgctcgtatccggaacagttgcc
gctagcgcgctgctgggcgcatgcttgcactcggcgctagcttctagcgcttggggcctg
tttggtgaagtagttgtagtggccgcgctgtctgcacacaaaaagctgatctggcacgtt
gaccacgtgctggcgtgcgtttattcggctggcaccaacgagtgtaagcgcgccgcgcag
ctgctagccggcagattcgcgcctcgagactcagaagacgtcgtgtgcgaaacaactctg
ctaagtttgattgaaaatctggctgacgccaccgtcctgcctctgctgtactacgctgcc
ggcggcttgccggcgctcgcaagctataaagcgatcgacttgctagactcgctaatggct
aattttagcgctgtaaacgccgacgttgcttcgtggctagcatgagctgacgatttggcc
ggctggctaccgtgagctgctttgtgtttgggacgaagaggcgcgcgcgcgcgccttgtc
aaagctgtcaagttttgagctgttgcgtggtttgcagccgcgctagggctgcgagctagc
acgcgcgctgtgtacttcagagcatgtgttagaggcgcagtagcaaacgttggtggcagg
cgggctgatggcgtggacctgaggcgcgcgcagctgctggcttgcgccgtgtgcttagcg
ctgtgctaa
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