Candidatus Hodgkinia cicadicola Dsem: HCDSEM_020
Help
Entry
HCDSEM_020 CDS
T00938
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hci03016
]
HCDSEM_020 (trmE)
Transfer RNA biogenesis [BR:
hci03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCDSEM_020 (trmE)
Prokaryotic type
Methyltransferases
HCDSEM_020 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MMR_HSR1
RsgA_GTPase
Dynamin_N
FeoB_N
SRPRB
AFOR_N
Lon_lid
Motif
Other DBs
NCBI-ProteinID:
ACT34209
LinkDB
All DBs
Position
complement(18763..19914)
Genome browser
AA seq
383 aa
AA seq
DB search
MKPTSSTRQADSLRFESAAPTVCAVASFTPCAICIVRITGSGTLRALTKLVSKLPKAGAC
AVQKLAIAGEALNDMITTGVVRWQPAPRSPTGEDYAEVSTVGASWVVESVVSKLLSWGVK
KAARGEFTRRALANNKLALADVKQLAGAFSVSVSSVLESAKIRRVEQSLAAAAAAARSGF
AGTTAPAAARAASQLARSSTTCSACVIGLSNAGKSSLFNALTHDVKAIVHRGKMTTRDVV
SVRKGEVVFCDTPGLENTADDVEAKALAAAKRRVDTANVTVVVWAGDKPPSFVRLSSRSA
VVTATSKADLVHKLKPSQADVATSAYTLEGVTKLERKLRRLCRSVIKLRRRASTAQWSQT
NLEAACDRARLAALITQKLCVGK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccaacgtcaagcacgcgtcaagctgacagcttgcgatttgagtcggcggcgccc
acagtttgcgcagtcgcaagcttcacgccctgtgctatatgcatagttaggataaccgga
agtggcacactaagagcgttaacgaaacttgtaagcaagctaccaaaagctggcgcgtgc
gcagtgcaaaagctggctatcgctggcgaggcgctaaacgacatgataacaacaggcgtt
gtgcgctggcagccagcgcccagatcgccaaccggcgaagactatgccgaagttagcaca
gtaggcgctagctgggtggtggaaagcgtagttagcaagctgctaagctggggcgtaaaa
aaagccgcaagaggcgagtttacaaggcgagcgctcgcaaacaacaagctggcgctagca
gacgtgaagcagctagccggcgcgtttagcgtcagcgttagctcagttttggaaagcgct
aaaatcaggcgcgtcgagcaatcgctggcggcggcggcagcagccgcgcgctcggggttc
gcgggcacaacagcgccagcggcagcgcgcgcagcaagccagcttgcgcgcagcagcaca
acgtgcagcgcgtgcgtgataggtttgtcaaacgccggcaagtcgtcgctgtttaacgcc
ctaacgcacgacgtcaaagccattgtacacagggggaaaatgacaactcgcgacgtcgtt
agcgttcgcaaaggcgaagttgtgttttgtgacacgcctgggcttgaaaacacagccgac
gacgtcgaagccaaggcgctagctgcagccaagcgtcgagtcgacaccgctaacgtgaca
gtggtggtgtgagccggcgacaagccgccaagcttcgttagacttagttcgcgttcagcc
gtcgtaaccgcgacatcaaaagccgacttagtacacaagcttaaaccttcccaagccgat
gtggccacatcggcttacacgctggagggcgtgacaaagcttgagcgcaagctgaggcgc
ttatgtagaagcgtcattaagcttaggcggcgcgcgtcgacagcgcagtggtctcaaacg
aacttagaggcggcgtgcgacagagcgcggctagcagctttaattactcaaaagctttgc
gtgggcaaatag
DBGET
integrated database retrieval system
