Candidatus Hodgkinia cicadicola Dsem: HCDSEM_060
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Entry
HCDSEM_060 CDS
T00938
Symbol
gatB
Name
(GenBank) putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00970
Aminoacyl-tRNA biosynthesis
hci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCDSEM_060 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hci03029
]
HCDSEM_060 (gatB)
Enzymes [BR:
hci01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
HCDSEM_060 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
HCDSEM_060 (gatB)
Mitochondrial biogenesis [BR:
hci03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HCDSEM_060 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
Motif
Other DBs
NCBI-ProteinID:
ACT34248
LinkDB
All DBs
Position
45314..46354
Genome browser
AA seq
346 aa
AA seq
DB search
MRRVAALIAKPARYLRVGLMPIEVVVGLELHAKLNIGSKLFSGELGLVHPLDEGMPGSLP
VLNSTRLGFLAALARLLDSRLASVASFSRKSYFCVDLPLGYQLTQELEPIMAGGGVCLRS
SHVRRERDVGFIKIGLEHDSGRFVASKTQVEFVRAGVGLMEMATCPCVDGCALKAIVAKL
RLALKAIGACEGLMADADLRFDVNVSASLPLAALSCRTEVKNVNWLTMADELVAREAVRA
LCGSRRETRAARSPWLATSASRRKELSLEYRHARDADLPAVKLWWRSCLTRQLWVESYWG
LSHGVATTFELWPSGVFTASGFDRLLLALKLGEWRCWRARLAAARK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgtgttgcagccctgatagctaagcctgcgcgctacctgcgcgtaggcctgatg
ccgattgaagtagttgtgggtttggagctgcacgccaagcttaacattggctcaaagctg
ttttcaggcgagctaggcttggtccaccccctagacgagggcatgcccggcagcttgccg
gtgcttaattcgacgcggcttgggtttttggctgcgctagcgcgtttgcttgatagccgc
ttggcgtcagtcgcaagcttttcaagaaaaagctatttttgtgttgatttgcccctaggc
tatcagcttactcaggagcttgagccaataatggctggggggggtgtgtgtttgcgctcg
tcgcatgttcgccgcgagcgcgacgttggctttattaaaatcggcttggagcacgactcg
ggtaggtttgtggcctctaaaactcaagttgagtttgtaagagctggtgttggcttaatg
gaaatggctacgtgtccgtgtgttgacggctgcgcgctcaaagcgattgttgccaagctg
cggctggcgctcaaagcgattggtgcttgcgaggggttaatggctgacgccgacctgcgg
tttgatgttaatgtgtcggcttctctgccgcttgcggcgttgagctgcagaacagaagtt
aagaacgtcaactggctaacaatggctgacgagctggtggcgcgcgaagctgtaagagcg
ctttgcggctcgcgccgcgaaactagggctgcacgctcgccgtggctagccacgtcggct
tcgaggcgcaaggagctgagcctcgagtacaggcatgcgcgagacgctgacttgcccgcg
gtaaagctgtgatggcgtagctgcttgacacgccagctttgggttgaaagctattgaggg
ctgtcgcatggcgttgccacaacgtttgagctgtggccgagcggcgtgttcacagcgtct
ggttttgatcgcttgttgctggcgctcaagcttggggagtggcgatgctggcgcgcccgt
ttggctgctgcgcgaaagtag
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