Candidatus Hodgkinia cicadicola Dsem: HCDSEM_088
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Entry
HCDSEM_088 CDS
T00938
Symbol
rpsE
Name
(GenBank) putative 30S ribosomal subunit protein S5
KO
K02988
small subunit ribosomal protein S5
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCDSEM_088 (rpsE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hci03011
]
HCDSEM_088 (rpsE)
Ribosome [BR:
hci03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCDSEM_088 (rpsE)
Bacteria
HCDSEM_088 (rpsE)
Archaea
HCDSEM_088 (rpsE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
ACT34274
LinkDB
All DBs
Position
66533..67114
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AA seq
193 aa
AA seq
DB search
MRGGGRRPPNLSQFAPKRANRFPSKPSIDLSQRASAGNEPKLAALPLAFEKVLKLSRVSK
VVRGGRKYRHSALVVVGDAQGRVGSATAKAADAADATAKATRRAAAAMISVKLLKGGELA
YDVVGVHNATRVDLRATRRGAGVRAGAAARAVLDAAGVRAVTAKLTGPNTEHNVVNAVLN
ALKTISSYQRIWG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggggagggcgtcgtccgcctaatttgagccagtttgcacctaaaagagctaat
cgttttccttctaaacccagcattgacttgagccagcgcgcaagcgccggcaacgagccc
aagcttgcggctttgccgctggctttcgaaaaagttcttaagctttccagggtgtccaag
gttgtgaggggaggtaggaagtataggcatagcgcgctggttgtggtcggtgacgcgcag
gggcgcgtcgggtcagctaccgccaaagccgccgacgctgccgacgccacggctaaagcc
actaggagggcggctgcggctatgattagcgtgaagctgcttaaaggcggtgagctggca
tacgatgtggttggagtgcacaacgccacgcgcgtagatttgcgagctactagacgcggc
gctggcgttcgcgctggcgctgcggctagggctgttttggacgcggctggcgttcgcgct
gttaccgcgaagcttactggacctaacacggagcacaacgttgttaacgccgtgcttaat
gcgctcaaaacgatttcaagctatcagcgaatatgaggctag
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