Candidatus Hodgkinia cicadicola Dsem: HCDSEM_122
Help
Entry
HCDSEM_122 CDS
T00938
Symbol
infB
Name
(GenBank) putative translation initiation factor IF-2, C terminal fragment
KO
K02519
translation initiation factor IF-2
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hci03012
]
HCDSEM_122 (infB)
03029 Mitochondrial biogenesis [BR:
hci03029
]
HCDSEM_122 (infB)
Translation factors [BR:
hci03012
]
Eukaryotic type
Initiation factors
MTIFs
HCDSEM_122 (infB)
Prokaryotic type
HCDSEM_122 (infB)
Mitochondrial biogenesis [BR:
hci03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
HCDSEM_122 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
FeoB_N
Ras
SRPRB
Dynamin_N
Roc
AIG1
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
ACT34303
LinkDB
All DBs
Position
complement(88782..90242)
Genome browser
AA seq
486 aa
AA seq
DB search
MSAWLECPELATSQLVTSTAHADARAAAAASAIDSVPKVATVTVLGHINHGKTSLLDTIT
NKRVAASEAGGITQQLRSHCLKHKGNKINLLDTPGHSLFESIRLNTMCVTDAAMLVVAAN
EGVSCQTRECAGYVASRGLPALVVYTKLDLGMTALQRARAELVKLGIALESEGGWVPEVC
VSARSKENVQLLLDVLCSVLEAEKAECDVGARPQGVVLDVSASEGCETRACVLVTAGVLT
PGRALASARALKLANGVRFAMASTLTFVTGVVEHVKPGQLLTTQRGETALPARASQVAIV
IKADSLSSIQGLNALMTARRVSIAHASVGPLTDANVALASAVGSLAVAFNTKVSAEARKA
AIKLGVTLVEADVVYAVADAIEAALCAKQRERATARATVVKGSGVRDSAILGAKMTRGEL
RARQRVEVWRGDANVGSLTVCGLNRLGAPVSTVRRGQEFELCVDASASAPAVIKPGDELK
ANTARG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcatggcttgagtgcccagagctagccaccagccagcttgtgacgtctacggcg
cacgccgacgccagagcagccgcggcggcgagcgcaatagacagcgtgccgaaggtggcc
acagtcacagtgctaggtcacataaatcatggaaaaaccagcttgctggacacaataact
aacaagcgcgttgcagcttcggaggcagggggcataacccagcagctcagaagccactgc
ttaaagcacaaaggcaacaagattaacctgctggacacgccgggccactcgctgtttgaa
agcattagactaaacacgatgtgcgttacggacgctgcgatgctggtggtggcagcaaac
gaaggcgtaagctgccagacgcgcgagtgcgcaggctacgtggcgagccgaggcttgcca
gcgctagtggtgtacacgaagctagacctcgggatgacggcgctgcagagagcgcgcgcc
gagcttgtaaagcttggaatagcgctcgaaagcgagggggggtgggtgccggaggtgtgt
gtgtcggcgaggtcgaaagaaaacgtccagctgctgctggatgtgctatgctcagttttg
gaagcggagaaagccgaatgcgacgtgggcgcgcgcccgcagggtgtggtgctagatgtg
agcgctagcgaaggctgcgaaaccagagcgtgtgtgctggttacggcaggcgtgctaacg
ccggggcgagcgctagctagcgcgcgggcgctcaagctagcaaacggagtgcggttcgca
atggcgtcgacgctgacttttgttacaggagttgtagaacatgtaaaacctgggcagctg
ctgacgacgcagcgcggcgagaccgcgctgccagcgcgcgctagccaggttgcaatcgta
atcaaagccgactcgctcagctcgatacaaggtttaaacgcgctaatgacggcgcggcgc
gtgagcatagcccacgcaagcgtaggtccgctaacggacgccaacgtggctttggcttca
gccgtcggctcgctagccgtggcgttcaacaccaaggtgagcgccgaagccagaaaagcc
gcaatcaagcttggggttacgctagtggaagccgacgtcgtgtacgcggtagctgacgcg
atagaagccgcgttgtgcgcgaagcagcgcgaacgcgccacggcgcgcgccacagttgtt
aaaggcagcggcgtgcgcgatagcgcgatacttggcgctaagatgacgcgcggcgagctg
cgagcgcgccagcgcgtcgaagtgtgacgaggcgacgccaacgtcggctcgctaacagtc
tgcggcctcaatcgcctgggcgcaccagttagcaccgtaagacgcggccaggagttcgag
ctgtgcgttgacgcgtcagcttcggcgccagccgtaataaaaccaggtgacgagctgaag
gcgaacacagcgcgcggctag
DBGET
integrated database retrieval system
