Candidatus Hodgkinia cicadicola Dsem: HCDSEM_151
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Entry
HCDSEM_151 CDS
T00938
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCDSEM_151 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hci03019
]
HCDSEM_151 (groL)
03110 Chaperones and folding catalysts [BR:
hci03110
]
HCDSEM_151 (groL)
03029 Mitochondrial biogenesis [BR:
hci03029
]
HCDSEM_151 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hci04147
]
HCDSEM_151 (groL)
Enzymes [BR:
hci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HCDSEM_151 (groL)
Messenger RNA biogenesis [BR:
hci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HCDSEM_151 (groL)
Chaperones and folding catalysts [BR:
hci03110
]
Heat shock proteins
HSP60 / Chaperonin
HCDSEM_151 (groL)
Mitochondrial biogenesis [BR:
hci03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HCDSEM_151 (groL)
Exosome [BR:
hci04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HCDSEM_151 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HCDSEM_151 (groL)
Exosomal proteins of breast cancer cells
HCDSEM_151 (groL)
Exosomal proteins of colorectal cancer cells
HCDSEM_151 (groL)
Exosomal proteins of bladder cancer cells
HCDSEM_151 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACT34325
LinkDB
All DBs
Position
112175..113785
Genome browser
AA seq
536 aa
AA seq
DB search
MAKQLLFGVDARNKLVAGVNALADAVKVTLGPKGRNVVIERAFGPPRVTKDGVTVAKEIE
LGDKFENVGAQMVREVAAKTNDVAGDGTTTATVLAQAIIKEGVKAVATGANPVDLKRGID
LAVDEVAKILHSNSKRISSLEEIAQVATISANGERQIGLDIAEAMQRVGGDGVITVEEAR
AAATELEVVEGVQFDRGYLSPYFVTNQEKMVCELDNPYVLLYDRRISSLQALVPLLETVV
QTNRCLLVVADDVEGEALATLVVNKLRAGLRVAGVKAPGFGDRKKQMLEDVAVLTGAQVV
SEDIGAKLENVTLDKLGRARKVVITKDTTTIVDGGGSKVELRNRISQIKAQWQDSASDYE
RERLHERLARLSGGVAVIKVGGVTEAEVKEKKDRVEDALNATRAAVQEGIVAGGGVALLW
ASKAMAPPAVVGDERVGFDILNRALCAPAKQIAVNAGYDSSLVVGKVLESGSSSFGYDAQ
AGRYGDMLAMGIVDPVKVVRTALQDAASVAGLLITTEAIVAEAAKKDKPTLQSDAS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagcttttgtttggcgtcgacgccagaaacaagctggttgccggtgttaac
gcgctagccgacgccgtcaaagttacgttaggtccgaagggccgaaacgtggttatagag
cgcgcgtttgggccgccgcgagtaaccaaagacggtgtaactgttgctaaagaaatagag
ctgggggacaagtttgaaaacgtcggagctcaaatggttcgagaggttgcggccaaaacc
aacgacgtggccggcgacggcacgaccacggccacggtgctagcgcaagccataataaaa
gagggcgtgaaggctgtggcaactggcgccaaccccgtagaccttaaacgaggtattgat
ttggcagtcgacgaggtggccaagatcctgcactccaattcgaagcgaatttcaagctta
gaggagattgcgcaggttgcgactatatcggctaacggcgagcgccagattgggctagat
attgctgaagcgatgcaacgggtcgggggcgacggcgtcataacggttgaagaggcaagg
gctgcggccaccgagcttgaagtagttgaaggggttcagtttgacagaggctacttgtca
ccatactttgtaactaatcaagaaaagatggtgtgcgagctggacaacccctacgtgctg
ctgtacgacagaaggatttcaagcttgcaggcgctcgtgcccctgctagagacggtggtg
cagaccaacaggtgcttgctggttgtggccgacgacgtagagggtgaggcgctggccacg
ctggtggttaacaagcttagagctgggctgagggttgcgggcgtgaaggcgccggggttt
ggagataggaagaagcagatgttggaagacgtggccgtgctaacgggtgcgcaagtagtt
agcgaggacatcggagctaagcttgaaaacgtcacgttagacaagctggggcgggcgcga
aaagttgtgataaccaaagacaccacaaccatcgttgacggcgggggcagtaaggttgag
ctgaggaacaggatatcgcaaataaaggcccagtggcaggacagcgcgtccgactacgag
agggagaggctgcacgagagactggctaggctttcggggggggtcgccgttatcaaagtt
ggtggcgtcaccgaagctgaagttaaggagaaaaaggacagggttgaagacgcgctcaac
gccacgcgcgccgccgtgcaggaaggcatagttgctggagggggtgtggcgctgctgtgg
gcttccaaagctatggcgccgccggctgttgtcggagacgagcgcgtaggcttcgacatt
ttaaacagggcgctgtgcgcgcctgctaagcaaatagcagtaaacgctggctacgactcg
tcgcttgttgtgggcaaggtgctagagtccggctcgtcgtcgtttggttatgatgcgcaa
gccggccgctacggcgacatgcttgctatgggcattgtggacccagttaaggtggttagg
actgcgctgcaggacgcggcgtcagttgctggccttctaataactacggaagccatcgtt
gcggaggcggccaagaaagacaagcctacgcttcagtcagacgcaagctag
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