Candidatus Hodgkinia cicadicola Dsem: HCDSEM_152
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Entry
HCDSEM_152 CDS
T00938
Symbol
rpsA
Name
(GenBank) putative 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCDSEM_152 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hci03011
]
HCDSEM_152 (rpsA)
Ribosome [BR:
hci03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCDSEM_152 (rpsA)
Bacteria
HCDSEM_152 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ACT34326
LinkDB
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Position
complement(113760..115487)
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AA seq
575 aa
AA seq
DB search
MSGVCKAAAEVCKLEQVKNLFEGKLVEGVVTAKNQSFMLVDIGFKSDVKVGCMGVWDYYK
YDVGQPIEVCVERLESEAGEVMASRSELSEDEAWAAAASAQAQHSWVRGEVMAKVQEGHA
VQVFGITALLPFELTDRRFWYELATCSEVEVRVFEVNREANTLTLSKQVEGDANEDASPS
LKLTASDQLWCVVNTVDEEGVHVDMGWRNGLVRLDHMAWFSIVELLNALFAGCAISAMFY
AEDLEGDEATLVVEWPEGDKLPKPRKWWLESAGGGRRAAEEAEELDDDEEGRGARQQLGG
ADEDEDEYERESESEREREGAAGGAKEGCGDDGASRSWTNIRKLEGESEERKLQALKQPA
AGGEQPDGQNKKQKAWSWEGRGWGLGSRQLTGGGGAPSQQAEAQPHKEPVAYGVIEDVSG
EALAIRASSALALLVVAEDFDVSNVEAALAEEFVFRGDVVKMLPLAISYTYGSVEIDLDV
DGVKYFKFVKLCWGRAMMATVLEADNGVVAVKLADGIYGKLVVGDDAAAIDEATELGKQA
GDVIDVVMCDFNPETNTIFLMAVDDEQASLRLTEA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcgtttgtaaggcagcagccgaagtttgcaagctggagcaggttaaaaacctg
tttgaaggcaagctagtagaaggcgtcgtgacggcaaaaaaccaaagcttcatgctagtt
gacatcggattcaagtccgacgtgaaggtggggtgcatgggcgtgtgggactactataag
tatgatgttggacagccgattgaggtgtgtgttgagcgcttggagtcggaggctggcgag
gtgatggcgtctagaagcgagcttagcgaagacgaggcgtgggcggcggcggcgagcgcg
caagcgcagcacagctgagtgagaggcgaggtgatggccaaggtgcaagaagggcacgct
gtgcaggtgtttggcattacggcgctgctgccgttcgagctcacagacaggcgattctga
tatgagctggctacgtgctccgaggtagaagtgagggtgttcgaggtaaacagagaagcc
aacacgttaactttgagcaagcaagttgagggcgacgcaaacgaagacgcaagccccagc
ctcaagctgacagctagcgaccagctttggtgtgtggttaacacggtagacgaagagggt
gtgcacgtggacatgggttggcgaaacgggctagtgcgcctagatcacatggcgtggttt
tcaatcgttgagctgctgaacgcgctgtttgcgggatgcgcgatcagcgccatgttttat
gccgaagatctggaaggcgacgaagccacgctggtggtggagtggccggaaggcgacaag
cttccgaagccgagaaaatggtggcttgagagcgcgggtgggggcagacgcgcagccgag
gaagcggaggagctggacgacgacgaagaaggtcggggcgcgcgccagcagctggggggc
gcggacgaggacgaagacgagtacgagcgcgaaagcgaaagcgagcgcgagcgcgagggc
gcggccggcggcgcgaaggaaggctgcggcgatgatggcgccagcagaagttgaaccaat
ataagaaagctggaaggcgagtcagaagagcgcaagctgcaagctttaaaacagccggcg
gctggaggcgagcagccggatggccaaaacaaaaaacagaaagcctgaagctgagaaggc
aggggctggggccttggcagccgccagctgacgggtggcggcggcgcgccatcacagcaa
gccgaagcccagcctcataaagaaccagtggcttatggcgtaatagaagacgtaagcggc
gaagcgctagcaatacgcgcttcgtcagcgctagcgctgctggtggtggccgaagacttt
gacgtgagcaacgtcgaagccgcgttagccgaagagtttgtgttcagaggcgacgtggtc
aaaatgctgcccctagccataagctacacctacggaagcgtggaaatcgatttagatgtg
gacggtgtcaagtactttaagtttgtcaagctgtgttgggggcgtgcgatgatggcaaca
gtgctggaagcggacaatggggttgtagccgttaagctcgcggacggaatctatggaaag
ctggtagtgggcgacgacgcggctgctattgacgaagccaccgagctcggaaagcaagca
ggggacgtgatcgacgtagtgatgtgcgacttcaaccccgaaaccaacaccattttttta
atggcggtggacgacgagcaagctagcttgcgtctgactgaagcgtag
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